Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PRIM2P49643 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRIM2P49643 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRIM2P49643 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRIM2P49643 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRIM2P49643 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRIM2P49643 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRIM2P49643 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PRIM2P49643 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRIM2P49643 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PRIM2P49643 PTCHD3P3-201ENST00000403073 906 ntBASIC15.81■□□□□ 0.12
PRIM2P49643 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.81■□□□□ 0.12
PRIM2P49643 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.81■□□□□ 0.12
PRIM2P49643 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.81■□□□□ 0.12
PRIM2P49643 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.81■□□□□ 0.12
PRIM2P49643 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.81■□□□□ 0.12
PRIM2P49643 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRIM2P49643 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRIM2P49643 PI4KAP1-204ENST00000612579 1703 ntBASIC15.81■□□□□ 0.12
PRIM2P49643 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.81■□□□□ 0.12
PRIM2P49643 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PRIM2P49643 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.81■□□□□ 0.12
PRIM2P49643 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.81■□□□□ 0.12
PRIM2P49643 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRIM2P49643 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PRIM2P49643 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRIM2P49643 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRIM2P49643 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRIM2P49643 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PRIM2P49643 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.8■□□□□ 0.12
PRIM2P49643 AC006504.4-201ENST00000592118 1568 ntBASIC15.8■□□□□ 0.12
PRIM2P49643 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.8■□□□□ 0.12
PRIM2P49643 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.8■□□□□ 0.12
PRIM2P49643 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.8■□□□□ 0.12
PRIM2P49643 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.8■□□□□ 0.12
PRIM2P49643 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.8■□□□□ 0.12
PRIM2P49643 RN7SL510P-201ENST00000581311 263 ntBASIC15.8■□□□□ 0.12
PRIM2P49643 AL121912.1-201ENST00000603683 238 ntBASIC15.8■□□□□ 0.12
PRIM2P49643 AC013467.2-201ENST00000605472 835 ntBASIC15.8■□□□□ 0.12
PRIM2P49643 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.8■□□□□ 0.12
PRIM2P49643 AL139011.1-202ENST00000642063 584 ntBASIC15.8■□□□□ 0.12
PRIM2P49643 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.8■□□□□ 0.12
PRIM2P49643 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PRIM2P49643 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 ME2P1-201ENST00000426028 1970 ntBASIC15.8■□□□□ 0.12
PRIM2P49643 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.8■□□□□ 0.12
PRIM2P49643 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.8■□□□□ 0.12
PRIM2P49643 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRIM2P49643 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.8■□□□□ 0.12
PRIM2P49643 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PRIM2P49643 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PRIM2P49643 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PRIM2P49643 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 TOP3BP1-201ENST00000420768 1380 ntBASIC15.79■□□□□ 0.12
PRIM2P49643 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 AC004870.1-201ENST00000315132 882 ntBASIC15.79■□□□□ 0.12
PRIM2P49643 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.79■□□□□ 0.12
PRIM2P49643 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRIM2P49643 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.79■□□□□ 0.12
PRIM2P49643 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.79■□□□□ 0.12
PRIM2P49643 RPS2P1-201ENST00000434010 821 ntBASIC15.79■□□□□ 0.12
PRIM2P49643 AC087163.2-201ENST00000457299 853 ntBASIC15.79■□□□□ 0.12
PRIM2P49643 AF186996.4-201ENST00000467186 377 ntBASIC15.79■□□□□ 0.12
PRIM2P49643 RNPS1P1-201ENST00000507437 918 ntBASIC15.79■□□□□ 0.12
PRIM2P49643 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PRIM2P49643 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.79■□□□□ 0.12
PRIM2P49643 GGTLC5P-201ENST00000617623 998 ntBASIC15.79■□□□□ 0.12
PRIM2P49643 MIR1199-201ENST00000621445 119 ntBASIC15.79■□□□□ 0.12
PRIM2P49643 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms