Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX5P48382 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.13■□□□□ 0.81
RFX5P48382 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RFX5P48382 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.13■□□□□ 0.81
RFX5P48382 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.13■□□□□ 0.81
RFX5P48382 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFX5P48382 AL079307.3-201ENST00000556114 283 ntBASIC20.13■□□□□ 0.81
RFX5P48382 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.13■□□□□ 0.81
RFX5P48382 TEX28P1-201ENST00000613479 1221 ntBASIC20.13■□□□□ 0.81
RFX5P48382 TEX28P2-201ENST00000617764 1221 ntBASIC20.13■□□□□ 0.81
RFX5P48382 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RFX5P48382 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX5P48382 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX5P48382 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.13■□□□□ 0.81
RFX5P48382 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.13■□□□□ 0.81
RFX5P48382 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX5P48382 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.12■□□□□ 0.81
RFX5P48382 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.12■□□□□ 0.81
RFX5P48382 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RFX5P48382 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.12■□□□□ 0.81
RFX5P48382 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
RFX5P48382 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.12■□□□□ 0.81
RFX5P48382 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.12■□□□□ 0.81
RFX5P48382 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.12■□□□□ 0.81
RFX5P48382 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.12■□□□□ 0.81
RFX5P48382 AC027369.6-201ENST00000525520 931 ntBASIC20.12■□□□□ 0.81
RFX5P48382 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.12■□□□□ 0.81
RFX5P48382 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RFX5P48382 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RFX5P48382 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
RFX5P48382 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.12■□□□□ 0.81
RFX5P48382 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX5P48382 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RFX5P48382 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFX5P48382 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFX5P48382 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFX5P48382 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX5P48382 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFX5P48382 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX5P48382 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX5P48382 AL136982.4-201ENST00000437689 1740 ntBASIC20.11■□□□□ 0.81
RFX5P48382 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX5P48382 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFX5P48382 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX5P48382 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX5P48382 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX5P48382 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFX5P48382 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RFX5P48382 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RFX5P48382 SPDYE17-201ENST00000412399 783 ntBASIC20.11■□□□□ 0.81
RFX5P48382 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.11■□□□□ 0.81
RFX5P48382 MTND6P24-201ENST00000440466 518 ntBASIC20.11■□□□□ 0.81
RFX5P48382 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX5P48382 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX5P48382 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFX5P48382 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.11■□□□□ 0.81
RFX5P48382 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX5P48382 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX5P48382 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.11■□□□□ 0.81
RFX5P48382 AL365330.1-201ENST00000607459 531 ntBASIC20.11■□□□□ 0.81
RFX5P48382 AL844908.2-201ENST00000609461 460 ntBASIC20.11■□□□□ 0.81
RFX5P48382 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX5P48382 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFX5P48382 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX5P48382 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX5P48382 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX5P48382 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX5P48382 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.11■□□□□ 0.81
RFX5P48382 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX5P48382 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RFX5P48382 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX5P48382 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RFX5P48382 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFX5P48382 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX5P48382 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX5P48382 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX5P48382 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.1■□□□□ 0.81
RFX5P48382 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX5P48382 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX5P48382 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX5P48382 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.1■□□□□ 0.81
RFX5P48382 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms