Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TM4SF4P48230 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 MSTO2P-201ENST00000314835 1709 ntBASIC18.54■□□□□ 0.56
TM4SF4P48230 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TM4SF4P48230 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TM4SF4P48230 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.53■□□□□ 0.56
TM4SF4P48230 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.53■□□□□ 0.56
TM4SF4P48230 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF4P48230 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF4P48230 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF4P48230 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.53■□□□□ 0.56
TM4SF4P48230 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF4P48230 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TM4SF4P48230 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF4P48230 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.53■□□□□ 0.56
TM4SF4P48230 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.53■□□□□ 0.56
TM4SF4P48230 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF4P48230 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.53■□□□□ 0.56
TM4SF4P48230 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.53■□□□□ 0.56
TM4SF4P48230 TOMM22P5-201ENST00000416399 439 ntBASIC18.53■□□□□ 0.56
TM4SF4P48230 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF4P48230 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.53■□□□□ 0.56
TM4SF4P48230 AC106760.1-201ENST00000508690 800 ntBASIC18.53■□□□□ 0.56
TM4SF4P48230 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.53■□□□□ 0.56
TM4SF4P48230 AC120045.2-201ENST00000567334 178 ntBASIC18.53■□□□□ 0.56
TM4SF4P48230 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.53■□□□□ 0.56
TM4SF4P48230 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF4P48230 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.53■□□□□ 0.56
TM4SF4P48230 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF4P48230 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF4P48230 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.53■□□□□ 0.56
TM4SF4P48230 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF4P48230 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TM4SF4P48230 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TM4SF4P48230 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF4P48230 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.52■□□□□ 0.56
TM4SF4P48230 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.52■□□□□ 0.56
TM4SF4P48230 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF4P48230 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF4P48230 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF4P48230 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.52■□□□□ 0.56
TM4SF4P48230 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF4P48230 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.52■□□□□ 0.56
TM4SF4P48230 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF4P48230 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TM4SF4P48230 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TM4SF4P48230 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.52■□□□□ 0.56
TM4SF4P48230 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF4P48230 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF4P48230 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF4P48230 C1QBPP1-201ENST00000400117 770 ntBASIC18.52■□□□□ 0.56
TM4SF4P48230 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF4P48230 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TM4SF4P48230 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.52■□□□□ 0.56
TM4SF4P48230 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.52■□□□□ 0.56
TM4SF4P48230 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
TM4SF4P48230 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF4P48230 AC098818.2-201ENST00000564925 2320 ntBASIC18.52■□□□□ 0.56
TM4SF4P48230 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF4P48230 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
TM4SF4P48230 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TM4SF4P48230 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TM4SF4P48230 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TM4SF4P48230 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TM4SF4P48230 SLC25A24-204ENST00000569674 2357 ntBASIC18.52■□□□□ 0.55
TM4SF4P48230 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TM4SF4P48230 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TM4SF4P48230 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.51■□□□□ 0.55
TM4SF4P48230 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.51■□□□□ 0.55
TM4SF4P48230 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
TM4SF4P48230 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.51■□□□□ 0.55
TM4SF4P48230 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TM4SF4P48230 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 ACTG1P17-201ENST00000558391 1119 ntBASIC18.51■□□□□ 0.55
TM4SF4P48230 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.51■□□□□ 0.55
TM4SF4P48230 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.51■□□□□ 0.55
TM4SF4P48230 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TM4SF4P48230 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.51■□□□□ 0.55
TM4SF4P48230 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 AL008638.5-201ENST00000623814 1298 ntBASIC18.51■□□□□ 0.55
TM4SF4P48230 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.51■□□□□ 0.55
TM4SF4P48230 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 AC138028.6-201ENST00000616106 1482 ntBASIC18.51■□□□□ 0.55
TM4SF4P48230 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF4P48230 PCDHB17P-201ENST00000539533 2393 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms