Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLC1A1P43005 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLC1A1P43005 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 RNU1-129P-201ENST00000384064 167 ntBASIC17.32■□□□□ 0.36
SLC1A1P43005 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.32■□□□□ 0.36
SLC1A1P43005 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC1A1P43005 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC1A1P43005 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.32■□□□□ 0.36
SLC1A1P43005 U1.21-201ENST00000580816 167 ntBASIC17.32■□□□□ 0.36
SLC1A1P43005 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SLC1A1P43005 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 AC117500.6-201ENST00000624871 588 ntBASIC17.32■□□□□ 0.36
SLC1A1P43005 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC1A1P43005 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC1A1P43005 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC1A1P43005 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SLC1A1P43005 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC1A1P43005 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC1A1P43005 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
SLC1A1P43005 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC1A1P43005 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SLC1A1P43005 AC005622.1-201ENST00000636801 1703 ntBASIC17.31■□□□□ 0.36
SLC1A1P43005 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC1A1P43005 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SLC1A1P43005 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 PMS2P4-201ENST00000412466 1052 ntBASIC17.31■□□□□ 0.36
SLC1A1P43005 AL160237.2-201ENST00000556165 472 ntBASIC17.31■□□□□ 0.36
SLC1A1P43005 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC1A1P43005 AC148477.8-201ENST00000624298 468 ntBASIC17.31■□□□□ 0.36
SLC1A1P43005 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC1A1P43005 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC1A1P43005 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC1A1P43005 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A1P43005 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC1A1P43005 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC1A1P43005 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC1A1P43005 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC1A1P43005 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLC1A1P43005 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC1A1P43005 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.3■□□□□ 0.36
SLC1A1P43005 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC1A1P43005 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC1A1P43005 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC1A1P43005 MIR648-201ENST00000385046 94 ntBASIC17.3■□□□□ 0.36
SLC1A1P43005 HMGA1P7-201ENST00000406908 502 ntBASIC17.3■□□□□ 0.36
SLC1A1P43005 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SLC1A1P43005 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SLC1A1P43005 AL031432.2-201ENST00000566714 459 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms