Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.12■□□□□ 0.49
USP8P40818 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.11■□□□□ 0.49
USP8P40818 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
USP8P40818 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP8P40818 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.11■□□□□ 0.49
USP8P40818 SLC25A6P2-201ENST00000497974 877 ntBASIC18.11■□□□□ 0.49
USP8P40818 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.11■□□□□ 0.49
USP8P40818 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.11■□□□□ 0.49
USP8P40818 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.11■□□□□ 0.49
USP8P40818 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP8P40818 TOP3BP1-201ENST00000420768 1380 ntBASIC18.11■□□□□ 0.49
USP8P40818 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP8P40818 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP8P40818 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP8P40818 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.11■□□□□ 0.49
USP8P40818 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP8P40818 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP8P40818 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
USP8P40818 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.11■□□□□ 0.49
USP8P40818 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP8P40818 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.11■□□□□ 0.49
USP8P40818 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.11■□□□□ 0.49
USP8P40818 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP8P40818 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP8P40818 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.1■□□□□ 0.49
USP8P40818 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.1■□□□□ 0.49
USP8P40818 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.1■□□□□ 0.49
USP8P40818 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.1■□□□□ 0.49
USP8P40818 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 LINC00895-201ENST00000629028 1637 ntBASIC18.1■□□□□ 0.49
USP8P40818 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP8P40818 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.1■□□□□ 0.49
USP8P40818 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.1■□□□□ 0.49
USP8P40818 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.1■□□□□ 0.49
USP8P40818 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 AC092910.1-201ENST00000482027 1129 ntBASIC18.1■□□□□ 0.49
USP8P40818 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.1■□□□□ 0.49
USP8P40818 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
USP8P40818 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.1■□□□□ 0.49
USP8P40818 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.1■□□□□ 0.49
USP8P40818 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
USP8P40818 GGTLC5P-201ENST00000617623 998 ntBASIC18.1■□□□□ 0.49
USP8P40818 AC005593.1-201ENST00000624894 515 ntBASIC18.1■□□□□ 0.49
USP8P40818 FAM215A-202ENST00000632077 792 ntBASIC18.1■□□□□ 0.49
USP8P40818 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
USP8P40818 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
USP8P40818 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
USP8P40818 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.1■□□□□ 0.49
USP8P40818 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.1■□□□□ 0.49
USP8P40818 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
USP8P40818 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP8P40818 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP8P40818 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
USP8P40818 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.09■□□□□ 0.49
USP8P40818 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.09■□□□□ 0.49
USP8P40818 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP8P40818 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.09■□□□□ 0.49
USP8P40818 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
USP8P40818 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP8P40818 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.09■□□□□ 0.49
USP8P40818 AC006277.1-201ENST00000624348 1610 ntBASIC18.09■□□□□ 0.49
USP8P40818 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.09■□□□□ 0.49
USP8P40818 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP8P40818 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP8P40818 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP8P40818 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP8P40818 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.09■□□□□ 0.49
USP8P40818 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP8P40818 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.09■□□□□ 0.49
USP8P40818 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.09■□□□□ 0.49
USP8P40818 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP8P40818 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.09■□□□□ 0.49
USP8P40818 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.09■□□□□ 0.49
USP8P40818 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.09■□□□□ 0.49
USP8P40818 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.09■□□□□ 0.49
USP8P40818 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP8P40818 AP002469.2-201ENST00000531724 424 ntBASIC18.09■□□□□ 0.49
USP8P40818 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.09■□□□□ 0.49
USP8P40818 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP8P40818 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.09■□□□□ 0.49
USP8P40818 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP8P40818 AL773604.1-201ENST00000617417 272 ntBASIC18.09■□□□□ 0.49
USP8P40818 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms