Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.43■□□□□ 0.22
HMGCLP35914 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGCLP35914 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCLP35914 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
HMGCLP35914 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
HMGCLP35914 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGCLP35914 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCLP35914 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCLP35914 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.43■□□□□ 0.22
HMGCLP35914 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.43■□□□□ 0.22
HMGCLP35914 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.43■□□□□ 0.22
HMGCLP35914 AC079140.1-201ENST00000508039 487 ntBASIC16.43■□□□□ 0.22
HMGCLP35914 KRT8P48-201ENST00000515599 1220 ntBASIC16.43■□□□□ 0.22
HMGCLP35914 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
HMGCLP35914 AC023511.2-201ENST00000618803 211 ntBASIC16.43■□□□□ 0.22
HMGCLP35914 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HMGCLP35914 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGCLP35914 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCLP35914 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
HMGCLP35914 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCLP35914 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGCLP35914 AC079328.2-201ENST00000561241 3354 ntBASIC16.43■□□□□ 0.22
HMGCLP35914 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCLP35914 AC092364.2-201ENST00000596710 2692 ntBASIC16.42■□□□□ 0.22
HMGCLP35914 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCLP35914 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMGCLP35914 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCLP35914 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HMGCLP35914 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCLP35914 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HMGCLP35914 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMGCLP35914 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMGCLP35914 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.42■□□□□ 0.22
HMGCLP35914 AC211486.1-202ENST00000416371 468 ntBASIC16.42■□□□□ 0.22
HMGCLP35914 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCLP35914 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCLP35914 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 TIMM8BP1-201ENST00000452384 211 ntBASIC16.42■□□□□ 0.22
HMGCLP35914 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.42■□□□□ 0.22
HMGCLP35914 AC211476.1-201ENST00000503899 468 ntBASIC16.42■□□□□ 0.22
HMGCLP35914 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 AC105233.2-201ENST00000523697 349 ntBASIC16.42■□□□□ 0.22
HMGCLP35914 AF228730.5-201ENST00000530288 346 ntBASIC16.42■□□□□ 0.22
HMGCLP35914 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.42■□□□□ 0.22
HMGCLP35914 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 KRT8P23-201ENST00000560090 1207 ntBASIC16.42■□□□□ 0.22
HMGCLP35914 LINC01225-203ENST00000563550 1244 ntBASIC16.42■□□□□ 0.22
HMGCLP35914 AL138918.1-201ENST00000568306 659 ntBASIC16.42■□□□□ 0.22
HMGCLP35914 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCLP35914 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.42■□□□□ 0.22
HMGCLP35914 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCLP35914 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCLP35914 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCLP35914 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HMGCLP35914 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms