Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.73■□□□□ 0.11
PTPN6P29350 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PTPN6P29350 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PTPN6P29350 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.73■□□□□ 0.11
PTPN6P29350 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PTPN6P29350 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN6P29350 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PTPN6P29350 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN6P29350 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PTPN6P29350 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN6P29350 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.73■□□□□ 0.11
PTPN6P29350 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN6P29350 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PTPN6P29350 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.73■□□□□ 0.11
PTPN6P29350 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.73■□□□□ 0.11
PTPN6P29350 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.73■□□□□ 0.11
PTPN6P29350 AC145285.3-201ENST00000564603 959 ntBASIC15.73■□□□□ 0.11
PTPN6P29350 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.73■□□□□ 0.11
PTPN6P29350 AC005593.1-201ENST00000624894 515 ntBASIC15.73■□□□□ 0.11
PTPN6P29350 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.73■□□□□ 0.11
PTPN6P29350 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.73■□□□□ 0.11
PTPN6P29350 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN6P29350 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN6P29350 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PTPN6P29350 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN6P29350 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.73■□□□□ 0.11
PTPN6P29350 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN6P29350 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN6P29350 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN6P29350 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PTPN6P29350 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN6P29350 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.73■□□□□ 0.11
PTPN6P29350 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.73■□□□□ 0.11
PTPN6P29350 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.73■□□□□ 0.11
PTPN6P29350 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN6P29350 AC011270.2-201ENST00000624293 2550 ntBASIC15.73■□□□□ 0.11
PTPN6P29350 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN6P29350 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PTPN6P29350 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.72■□□□□ 0.11
PTPN6P29350 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
PTPN6P29350 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 PI4KAP1-204ENST00000612579 1703 ntBASIC15.72■□□□□ 0.11
PTPN6P29350 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN6P29350 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.72■□□□□ 0.11
PTPN6P29350 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN6P29350 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN6P29350 RNA5SP415-201ENST00000517246 115 ntBASIC15.72■□□□□ 0.11
PTPN6P29350 AC106730.1-201ENST00000566722 1090 ntBASIC15.72■□□□□ 0.11
PTPN6P29350 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN6P29350 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN6P29350 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN6P29350 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN6P29350 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.72■□□□□ 0.11
PTPN6P29350 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN6P29350 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN6P29350 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN6P29350 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PTPN6P29350 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PTPN6P29350 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN6P29350 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN6P29350 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PTPN6P29350 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN6P29350 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.71■□□□□ 0.11
PTPN6P29350 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PTPN6P29350 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN6P29350 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.71■□□□□ 0.11
PTPN6P29350 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN6P29350 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PTPN6P29350 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN6P29350 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN6P29350 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN6P29350 UNC93B6-202ENST00000528242 690 ntBASIC15.71■□□□□ 0.11
PTPN6P29350 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.71■□□□□ 0.11
PTPN6P29350 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.71■□□□□ 0.11
PTPN6P29350 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN6P29350 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.71■□□□□ 0.11
PTPN6P29350 AC010654.1-201ENST00000615722 808 ntBASIC15.71■□□□□ 0.11
PTPN6P29350 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.71■□□□□ 0.11
PTPN6P29350 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PTPN6P29350 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN6P29350 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PTPN6P29350 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN6P29350 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN6P29350 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PTPN6P29350 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms