Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHMLP26374 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMLP26374 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHMLP26374 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.91■□□□□ 0.78
CHMLP26374 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMLP26374 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.91■□□□□ 0.78
CHMLP26374 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CHMLP26374 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMLP26374 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHMLP26374 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMLP26374 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CHMLP26374 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMLP26374 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CHMLP26374 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMLP26374 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CHMLP26374 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMLP26374 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.9■□□□□ 0.78
CHMLP26374 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.9■□□□□ 0.78
CHMLP26374 AC093724.1-201ENST00000448659 1027 ntBASIC19.9■□□□□ 0.78
CHMLP26374 KRT18P3-201ENST00000451602 1288 ntBASIC19.9■□□□□ 0.78
CHMLP26374 AC074386.1-202ENST00000463561 864 ntBASIC19.9■□□□□ 0.78
CHMLP26374 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMLP26374 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CHMLP26374 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMLP26374 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.9■□□□□ 0.78
CHMLP26374 AC027601.4-201ENST00000611259 610 ntBASIC19.9■□□□□ 0.78
CHMLP26374 AC010491.1-201ENST00000563101 2797 ntBASIC19.9■□□□□ 0.78
CHMLP26374 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMLP26374 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 AC008894.3-201ENST00000624324 3103 ntBASIC19.9■□□□□ 0.78
CHMLP26374 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CHMLP26374 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMLP26374 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CHMLP26374 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
CHMLP26374 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CHMLP26374 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMLP26374 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMLP26374 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMLP26374 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMLP26374 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMLP26374 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHMLP26374 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHMLP26374 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.89■□□□□ 0.77
CHMLP26374 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMLP26374 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHMLP26374 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMLP26374 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMLP26374 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CHMLP26374 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMLP26374 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMLP26374 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMLP26374 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
CHMLP26374 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMLP26374 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.89■□□□□ 0.77
CHMLP26374 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMLP26374 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMLP26374 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMLP26374 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMLP26374 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CHMLP26374 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMLP26374 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMLP26374 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMLP26374 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMLP26374 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMLP26374 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.89■□□□□ 0.77
CHMLP26374 FAM197Y3-203ENST00000618346 717 ntBASIC19.89■□□□□ 0.77
CHMLP26374 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHMLP26374 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMLP26374 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMLP26374 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMLP26374 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CHMLP26374 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMLP26374 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CHMLP26374 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CHMLP26374 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.88■□□□□ 0.77
CHMLP26374 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMLP26374 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CHMLP26374 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMLP26374 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMLP26374 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms