Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.98□□□□□ -0.17
COL8A2P25067 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
COL8A2P25067 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
COL8A2P25067 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.98□□□□□ -0.17
COL8A2P25067 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.97□□□□□ -0.17
COL8A2P25067 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
COL8A2P25067 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.97□□□□□ -0.17
COL8A2P25067 LINC02199-201ENST00000506655 2702 ntBASIC13.97□□□□□ -0.17
COL8A2P25067 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
COL8A2P25067 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
COL8A2P25067 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.97□□□□□ -0.17
COL8A2P25067 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.97□□□□□ -0.17
COL8A2P25067 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.97□□□□□ -0.17
COL8A2P25067 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.97□□□□□ -0.17
COL8A2P25067 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.97□□□□□ -0.17
COL8A2P25067 FAM86GP-201ENST00000448322 971 ntBASIC13.97□□□□□ -0.17
COL8A2P25067 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.97□□□□□ -0.17
COL8A2P25067 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.97□□□□□ -0.17
COL8A2P25067 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 AC069262.1-201ENST00000539058 672 ntBASIC13.97□□□□□ -0.17
COL8A2P25067 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
COL8A2P25067 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.97□□□□□ -0.17
COL8A2P25067 AL512356.2-201ENST00000546955 174 ntBASIC13.97□□□□□ -0.17
COL8A2P25067 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.97□□□□□ -0.17
COL8A2P25067 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.97□□□□□ -0.17
COL8A2P25067 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.97□□□□□ -0.17
COL8A2P25067 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
COL8A2P25067 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
COL8A2P25067 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
COL8A2P25067 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.97□□□□□ -0.17
COL8A2P25067 OR6D1P-203ENST00000641209 4860 ntBASIC13.97□□□□□ -0.17
COL8A2P25067 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.97□□□□□ -0.17
COL8A2P25067 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL8A2P25067 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.96□□□□□ -0.17
COL8A2P25067 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.96□□□□□ -0.17
COL8A2P25067 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
COL8A2P25067 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
COL8A2P25067 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
COL8A2P25067 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
COL8A2P25067 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.96□□□□□ -0.17
COL8A2P25067 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.96□□□□□ -0.17
COL8A2P25067 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.96□□□□□ -0.17
COL8A2P25067 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.96□□□□□ -0.17
COL8A2P25067 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 ALG1L8P-201ENST00000533887 760 ntBASIC13.96□□□□□ -0.17
COL8A2P25067 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.96□□□□□ -0.17
COL8A2P25067 DUX4L27-201ENST00000554796 1261 ntBASIC13.96□□□□□ -0.17
COL8A2P25067 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.96□□□□□ -0.17
COL8A2P25067 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.96□□□□□ -0.17
COL8A2P25067 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL8A2P25067 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
COL8A2P25067 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.96□□□□□ -0.18
COL8A2P25067 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL8A2P25067 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
COL8A2P25067 AL118508.1-201ENST00000613502 2345 ntBASIC13.96□□□□□ -0.18
COL8A2P25067 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
COL8A2P25067 AC008677.1-201ENST00000519230 1561 ntBASIC13.96□□□□□ -0.18
COL8A2P25067 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL8A2P25067 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
COL8A2P25067 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
COL8A2P25067 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.96□□□□□ -0.18
COL8A2P25067 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
COL8A2P25067 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL8A2P25067 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms