Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.23■□□□□ 0.19
BCKDHBP21953 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.23■□□□□ 0.19
BCKDHBP21953 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.23■□□□□ 0.19
BCKDHBP21953 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.23■□□□□ 0.19
BCKDHBP21953 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.22■□□□□ 0.19
BCKDHBP21953 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 NOC2LP1-202ENST00000452600 2235 ntBASIC16.22■□□□□ 0.19
BCKDHBP21953 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
BCKDHBP21953 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.22■□□□□ 0.19
BCKDHBP21953 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
BCKDHBP21953 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.22■□□□□ 0.19
BCKDHBP21953 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.22■□□□□ 0.19
BCKDHBP21953 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
BCKDHBP21953 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.22■□□□□ 0.19
BCKDHBP21953 AC119751.2-201ENST00000504529 210 ntBASIC16.22■□□□□ 0.19
BCKDHBP21953 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.22■□□□□ 0.19
BCKDHBP21953 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.22■□□□□ 0.19
BCKDHBP21953 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.22■□□□□ 0.19
BCKDHBP21953 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.22■□□□□ 0.19
BCKDHBP21953 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.22■□□□□ 0.19
BCKDHBP21953 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
BCKDHBP21953 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
BCKDHBP21953 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
BCKDHBP21953 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BCKDHBP21953 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.21■□□□□ 0.19
BCKDHBP21953 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
BCKDHBP21953 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.21■□□□□ 0.19
BCKDHBP21953 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BCKDHBP21953 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BCKDHBP21953 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.21■□□□□ 0.19
BCKDHBP21953 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.21■□□□□ 0.19
BCKDHBP21953 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BCKDHBP21953 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BCKDHBP21953 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.21■□□□□ 0.19
BCKDHBP21953 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.21■□□□□ 0.19
BCKDHBP21953 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
BCKDHBP21953 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.21■□□□□ 0.19
BCKDHBP21953 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.21■□□□□ 0.19
BCKDHBP21953 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.21■□□□□ 0.19
BCKDHBP21953 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.21■□□□□ 0.19
BCKDHBP21953 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.21■□□□□ 0.19
BCKDHBP21953 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.21■□□□□ 0.19
BCKDHBP21953 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.21■□□□□ 0.19
BCKDHBP21953 SNX29P1-201ENST00000548357 1007 ntBASIC16.21■□□□□ 0.19
BCKDHBP21953 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
BCKDHBP21953 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
BCKDHBP21953 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
BCKDHBP21953 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.21■□□□□ 0.19
BCKDHBP21953 AC026979.3-201ENST00000607315 403 ntBASIC16.21■□□□□ 0.19
BCKDHBP21953 AC099568.2-201ENST00000609194 695 ntBASIC16.21■□□□□ 0.19
BCKDHBP21953 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.21■□□□□ 0.19
BCKDHBP21953 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.21■□□□□ 0.19
BCKDHBP21953 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
BCKDHBP21953 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.21■□□□□ 0.19
BCKDHBP21953 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BCKDHBP21953 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
BCKDHBP21953 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.21■□□□□ 0.19
BCKDHBP21953 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
BCKDHBP21953 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.21■□□□□ 0.19
BCKDHBP21953 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
BCKDHBP21953 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BCKDHBP21953 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
BCKDHBP21953 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BCKDHBP21953 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
BCKDHBP21953 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
BCKDHBP21953 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.21■□□□□ 0.18
BCKDHBP21953 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.21■□□□□ 0.18
BCKDHBP21953 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.21■□□□□ 0.18
BCKDHBP21953 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
BCKDHBP21953 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
BCKDHBP21953 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms