Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 CYP2A7P1-201ENST00000595391 815 ntBASIC15.41■□□□□ 0.06
TNFRSF1BP20333 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.41■□□□□ 0.06
TNFRSF1BP20333 AL445228.2-201ENST00000605589 952 ntBASIC15.41■□□□□ 0.06
TNFRSF1BP20333 AL355877.3-201ENST00000622820 899 ntBASIC15.41■□□□□ 0.06
TNFRSF1BP20333 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 GPAA1P2-202ENST00000606848 1787 ntBASIC15.41■□□□□ 0.06
TNFRSF1BP20333 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.41■□□□□ 0.06
TNFRSF1BP20333 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 AC008608.2-201ENST00000606089 416 ntBASIC15.4■□□□□ 0.06
TNFRSF1BP20333 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 AC068418.2-201ENST00000577309 3703 ntBASIC15.4■□□□□ 0.06
TNFRSF1BP20333 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TNFRSF1BP20333 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.39■□□□□ 0.05
TNFRSF1BP20333 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.39■□□□□ 0.05
TNFRSF1BP20333 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.39■□□□□ 0.05
TNFRSF1BP20333 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 ARMC10P1-201ENST00000313754 855 ntBASIC15.39■□□□□ 0.05
TNFRSF1BP20333 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFRSF1BP20333 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms