Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17■□□□□ 0.31
ERCC2P18074 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17■□□□□ 0.31
ERCC2P18074 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
ERCC2P18074 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17■□□□□ 0.31
ERCC2P18074 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17■□□□□ 0.31
ERCC2P18074 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17■□□□□ 0.31
ERCC2P18074 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ERCC2P18074 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17■□□□□ 0.31
ERCC2P18074 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17■□□□□ 0.31
ERCC2P18074 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17■□□□□ 0.31
ERCC2P18074 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ERCC2P18074 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ERCC2P18074 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 CROCCP1-201ENST00000426910 5675 ntBASIC16.99■□□□□ 0.31
ERCC2P18074 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.99■□□□□ 0.31
ERCC2P18074 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.99■□□□□ 0.31
ERCC2P18074 AC005622.1-201ENST00000636801 1703 ntBASIC16.99■□□□□ 0.31
ERCC2P18074 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.99■□□□□ 0.31
ERCC2P18074 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.99■□□□□ 0.31
ERCC2P18074 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 YBX2P1-201ENST00000394192 760 ntBASIC16.99■□□□□ 0.31
ERCC2P18074 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.99■□□□□ 0.31
ERCC2P18074 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.99■□□□□ 0.31
ERCC2P18074 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.99■□□□□ 0.31
ERCC2P18074 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.99■□□□□ 0.31
ERCC2P18074 MTDHP5-201ENST00000598980 586 ntBASIC16.99■□□□□ 0.31
ERCC2P18074 AC092902.6-201ENST00000641783 218 ntBASIC16.99■□□□□ 0.31
ERCC2P18074 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.99■□□□□ 0.31
ERCC2P18074 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
ERCC2P18074 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ERCC2P18074 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.99■□□□□ 0.31
ERCC2P18074 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ERCC2P18074 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC2P18074 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ERCC2P18074 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC2P18074 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC2P18074 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.98■□□□□ 0.31
ERCC2P18074 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.98■□□□□ 0.31
ERCC2P18074 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC2P18074 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC2P18074 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC2P18074 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ERCC2P18074 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.98■□□□□ 0.31
ERCC2P18074 CYP2T1P-202ENST00000641596 2535 ntBASIC16.98■□□□□ 0.31
ERCC2P18074 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ERCC2P18074 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms