Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CTPS1P17812 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CTPS1P17812 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.62■□□□□ 0.25
CTPS1P17812 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CTPS1P17812 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CTPS1P17812 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.62■□□□□ 0.25
CTPS1P17812 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CTPS1P17812 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.62■□□□□ 0.25
CTPS1P17812 AC079140.1-201ENST00000508039 487 ntBASIC16.62■□□□□ 0.25
CTPS1P17812 FAM86C2P-203ENST00000528684 1004 ntBASIC16.62■□□□□ 0.25
CTPS1P17812 AC243562.1-201ENST00000560672 389 ntBASIC16.62■□□□□ 0.25
CTPS1P17812 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.62■□□□□ 0.25
CTPS1P17812 AL138918.1-201ENST00000568306 659 ntBASIC16.62■□□□□ 0.25
CTPS1P17812 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.62■□□□□ 0.25
CTPS1P17812 AC006538.3-201ENST00000612495 578 ntBASIC16.62■□□□□ 0.25
CTPS1P17812 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.62■□□□□ 0.25
CTPS1P17812 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CTPS1P17812 AC105339.1-204ENST00000636249 355 ntBASIC16.62■□□□□ 0.25
CTPS1P17812 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CTPS1P17812 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.62■□□□□ 0.25
CTPS1P17812 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.62■□□□□ 0.25
CTPS1P17812 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.62■□□□□ 0.25
CTPS1P17812 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.62■□□□□ 0.25
CTPS1P17812 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.62■□□□□ 0.25
CTPS1P17812 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CTPS1P17812 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS1P17812 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.61■□□□□ 0.25
CTPS1P17812 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CTPS1P17812 AL662844.4-201ENST00000606367 2838 ntBASIC16.61■□□□□ 0.25
CTPS1P17812 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.61■□□□□ 0.25
CTPS1P17812 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 PCGF3-213ENST00000620529 1899 ntBASIC16.61■□□□□ 0.25
CTPS1P17812 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CTPS1P17812 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.61■□□□□ 0.25
CTPS1P17812 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CTPS1P17812 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.61■□□□□ 0.25
CTPS1P17812 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.61■□□□□ 0.25
CTPS1P17812 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.61■□□□□ 0.25
CTPS1P17812 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.61■□□□□ 0.25
CTPS1P17812 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.61■□□□□ 0.25
CTPS1P17812 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.61■□□□□ 0.25
CTPS1P17812 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.61■□□□□ 0.25
CTPS1P17812 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.61■□□□□ 0.25
CTPS1P17812 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.61■□□□□ 0.25
CTPS1P17812 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.61■□□□□ 0.25
CTPS1P17812 AC022145.2-201ENST00000598203 171 ntBASIC16.61■□□□□ 0.25
CTPS1P17812 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.61■□□□□ 0.25
CTPS1P17812 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CTPS1P17812 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CTPS1P17812 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.61■□□□□ 0.25
CTPS1P17812 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 AKAP8P1-201ENST00000434743 1349 ntBASIC16.61■□□□□ 0.25
CTPS1P17812 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CTPS1P17812 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CTPS1P17812 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CTPS1P17812 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS1P17812 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CTPS1P17812 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.6■□□□□ 0.25
CTPS1P17812 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CTPS1P17812 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CTPS1P17812 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms