Protein–RNA interactions for Protein: P13995

MTHFD2, Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2P13995 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MTHFD2P13995 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
MTHFD2P13995 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MTHFD2P13995 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.12■□□□□ 0.17
MTHFD2P13995 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MTHFD2P13995 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.11■□□□□ 0.17
MTHFD2P13995 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.11■□□□□ 0.17
MTHFD2P13995 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
MTHFD2P13995 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 PMS2P4-201ENST00000412466 1052 ntBASIC16.11■□□□□ 0.17
MTHFD2P13995 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.11■□□□□ 0.17
MTHFD2P13995 AL513480.1-201ENST00000451731 511 ntBASIC16.11■□□□□ 0.17
MTHFD2P13995 RNA5SP415-201ENST00000517246 115 ntBASIC16.11■□□□□ 0.17
MTHFD2P13995 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.11■□□□□ 0.17
MTHFD2P13995 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.11■□□□□ 0.17
MTHFD2P13995 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
MTHFD2P13995 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.11■□□□□ 0.17
MTHFD2P13995 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.11■□□□□ 0.17
MTHFD2P13995 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
MTHFD2P13995 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MTHFD2P13995 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
MTHFD2P13995 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
MTHFD2P13995 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MTHFD2P13995 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
MTHFD2P13995 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.1■□□□□ 0.17
MTHFD2P13995 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
MTHFD2P13995 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
MTHFD2P13995 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
MTHFD2P13995 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
MTHFD2P13995 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MTHFD2P13995 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MTHFD2P13995 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.1■□□□□ 0.17
MTHFD2P13995 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.1■□□□□ 0.17
MTHFD2P13995 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.1■□□□□ 0.17
MTHFD2P13995 RHOQP3-201ENST00000437982 621 ntBASIC16.1■□□□□ 0.17
MTHFD2P13995 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.1■□□□□ 0.17
MTHFD2P13995 KRT126P-201ENST00000549467 1181 ntBASIC16.1■□□□□ 0.17
MTHFD2P13995 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MTHFD2P13995 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.1■□□□□ 0.17
MTHFD2P13995 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 LINC02447-202ENST00000501888 2146 ntBASIC16.1■□□□□ 0.17
MTHFD2P13995 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.1■□□□□ 0.17
MTHFD2P13995 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
MTHFD2P13995 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.1■□□□□ 0.17
MTHFD2P13995 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.1■□□□□ 0.17
MTHFD2P13995 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MTHFD2P13995 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.1■□□□□ 0.17
MTHFD2P13995 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MTHFD2P13995 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
MTHFD2P13995 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MTHFD2P13995 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MTHFD2P13995 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MTHFD2P13995 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
MTHFD2P13995 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MTHFD2P13995 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.09■□□□□ 0.17
MTHFD2P13995 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.09■□□□□ 0.17
MTHFD2P13995 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MTHFD2P13995 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MTHFD2P13995 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MTHFD2P13995 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MTHFD2P13995 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.09■□□□□ 0.17
MTHFD2P13995 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MTHFD2P13995 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms