Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.85■□□□□ 0.77
COL11A2P13942 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.85■□□□□ 0.77
COL11A2P13942 SOCS2P1-201ENST00000417727 557 ntBASIC19.85■□□□□ 0.77
COL11A2P13942 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.85■□□□□ 0.77
COL11A2P13942 BCRP2-202ENST00000447763 634 ntBASIC19.85■□□□□ 0.77
COL11A2P13942 FAM86LP-201ENST00000478302 853 ntBASIC19.85■□□□□ 0.77
COL11A2P13942 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.85■□□□□ 0.77
COL11A2P13942 BCRP6-201ENST00000510112 632 ntBASIC19.85■□□□□ 0.77
COL11A2P13942 BCRP7-201ENST00000511549 544 ntBASIC19.85■□□□□ 0.77
COL11A2P13942 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.85■□□□□ 0.77
COL11A2P13942 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.85■□□□□ 0.77
COL11A2P13942 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.84■□□□□ 0.77
COL11A2P13942 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A2P13942 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A2P13942 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
COL11A2P13942 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A2P13942 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A2P13942 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
COL11A2P13942 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
COL11A2P13942 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A2P13942 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A2P13942 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A2P13942 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A2P13942 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A2P13942 HAUS4P1-201ENST00000406739 1145 ntBASIC19.84■□□□□ 0.77
COL11A2P13942 GOLGA2P4-201ENST00000441462 777 ntBASIC19.84■□□□□ 0.77
COL11A2P13942 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.84■□□□□ 0.77
COL11A2P13942 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A2P13942 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.84■□□□□ 0.77
COL11A2P13942 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.84■□□□□ 0.77
COL11A2P13942 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.84■□□□□ 0.77
COL11A2P13942 AC133539.2-201ENST00000604757 467 ntBASIC19.84■□□□□ 0.77
COL11A2P13942 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.84■□□□□ 0.77
COL11A2P13942 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.84■□□□□ 0.77
COL11A2P13942 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.84■□□□□ 0.77
COL11A2P13942 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.84■□□□□ 0.77
COL11A2P13942 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
COL11A2P13942 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COL11A2P13942 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A2P13942 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COL11A2P13942 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.84■□□□□ 0.77
COL11A2P13942 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL11A2P13942 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL11A2P13942 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.83■□□□□ 0.77
COL11A2P13942 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.83■□□□□ 0.77
COL11A2P13942 AL355864.2-201ENST00000447420 863 ntBASIC19.83■□□□□ 0.77
COL11A2P13942 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.83■□□□□ 0.77
COL11A2P13942 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.83■□□□□ 0.77
COL11A2P13942 TIMM17BP1-201ENST00000545713 516 ntBASIC19.83■□□□□ 0.77
COL11A2P13942 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL11A2P13942 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.83■□□□□ 0.77
COL11A2P13942 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.83■□□□□ 0.77
COL11A2P13942 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL11A2P13942 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
COL11A2P13942 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL11A2P13942 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.83■□□□□ 0.76
COL11A2P13942 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL11A2P13942 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.83■□□□□ 0.76
COL11A2P13942 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COL11A2P13942 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
COL11A2P13942 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.82■□□□□ 0.76
COL11A2P13942 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 ACTG1P3-201ENST00000431775 1114 ntBASIC19.82■□□□□ 0.76
COL11A2P13942 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.82■□□□□ 0.76
COL11A2P13942 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.82■□□□□ 0.76
COL11A2P13942 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 AC007551.1-201ENST00000457394 519 ntBASIC19.82■□□□□ 0.76
COL11A2P13942 PTP4A1P2-201ENST00000546033 454 ntBASIC19.82■□□□□ 0.76
COL11A2P13942 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.82■□□□□ 0.76
COL11A2P13942 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.82■□□□□ 0.76
COL11A2P13942 AC005252.2-201ENST00000624630 1141 ntBASIC19.82■□□□□ 0.76
COL11A2P13942 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.82■□□□□ 0.76
COL11A2P13942 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.82■□□□□ 0.76
COL11A2P13942 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
COL11A2P13942 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.82■□□□□ 0.76
COL11A2P13942 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COL11A2P13942 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 AC012441.1-201ENST00000446669 685 ntBASIC19.82■□□□□ 0.76
COL11A2P13942 AP001889.1-201ENST00000525414 633 ntBASIC19.82■□□□□ 0.76
COL11A2P13942 AP000812.2-201ENST00000538934 718 ntBASIC19.82■□□□□ 0.76
COL11A2P13942 DUX4L45-201ENST00000566406 1057 ntBASIC19.82■□□□□ 0.76
COL11A2P13942 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.82■□□□□ 0.76
COL11A2P13942 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A2P13942 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.81■□□□□ 0.76
COL11A2P13942 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.81■□□□□ 0.76
COL11A2P13942 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.81■□□□□ 0.76
COL11A2P13942 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms