Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
COL11A1P12107 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.5■□□□□ 0.55
COL11A1P12107 AC007389.4-201ENST00000454674 793 ntBASIC18.5■□□□□ 0.55
COL11A1P12107 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.5■□□□□ 0.55
COL11A1P12107 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.5■□□□□ 0.55
COL11A1P12107 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
COL11A1P12107 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 AL008721.1-201ENST00000609964 604 ntBASIC18.5■□□□□ 0.55
COL11A1P12107 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.5■□□□□ 0.55
COL11A1P12107 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
COL11A1P12107 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.5■□□□□ 0.55
COL11A1P12107 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.49■□□□□ 0.55
COL11A1P12107 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.49■□□□□ 0.55
COL11A1P12107 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
COL11A1P12107 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.49■□□□□ 0.55
COL11A1P12107 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.49■□□□□ 0.55
COL11A1P12107 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
COL11A1P12107 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.49■□□□□ 0.55
COL11A1P12107 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.49■□□□□ 0.55
COL11A1P12107 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.49■□□□□ 0.55
COL11A1P12107 RRP7BP-205ENST00000566851 833 ntBASIC18.49■□□□□ 0.55
COL11A1P12107 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.49■□□□□ 0.55
COL11A1P12107 WFDC1-204ENST00000613603 549 ntBASIC18.49■□□□□ 0.55
COL11A1P12107 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
COL11A1P12107 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.49■□□□□ 0.55
COL11A1P12107 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
COL11A1P12107 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.49■□□□□ 0.55
COL11A1P12107 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.49■□□□□ 0.55
COL11A1P12107 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.49■□□□□ 0.55
COL11A1P12107 AC112492.5-201ENST00000421897 457 ntBASIC18.49■□□□□ 0.55
COL11A1P12107 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.49■□□□□ 0.55
COL11A1P12107 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.49■□□□□ 0.55
COL11A1P12107 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.49■□□□□ 0.55
COL11A1P12107 AL158212.4-201ENST00000624062 1286 ntBASIC18.49■□□□□ 0.55
COL11A1P12107 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL11A1P12107 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.48■□□□□ 0.55
COL11A1P12107 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.48■□□□□ 0.55
COL11A1P12107 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.48■□□□□ 0.55
COL11A1P12107 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COL11A1P12107 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
COL11A1P12107 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.48■□□□□ 0.55
COL11A1P12107 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 AC080080.1-201ENST00000625121 2420 ntBASIC18.48■□□□□ 0.55
COL11A1P12107 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COL11A1P12107 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.48■□□□□ 0.55
COL11A1P12107 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
COL11A1P12107 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
COL11A1P12107 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
COL11A1P12107 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.48■□□□□ 0.55
COL11A1P12107 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL11A1P12107 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL11A1P12107 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
COL11A1P12107 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL11A1P12107 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
COL11A1P12107 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL11A1P12107 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.47■□□□□ 0.55
COL11A1P12107 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.47■□□□□ 0.55
COL11A1P12107 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms