Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
KRT3P12035 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
KRT3P12035 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT3P12035 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
KRT3P12035 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
KRT3P12035 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
KRT3P12035 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
KRT3P12035 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT3P12035 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT3P12035 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
KRT3P12035 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT3P12035 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT3P12035 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT3P12035 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT3P12035 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT3P12035 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT3P12035 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.44■□□□□ 0.38
KRT3P12035 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT3P12035 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT3P12035 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT3P12035 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT3P12035 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.44■□□□□ 0.38
KRT3P12035 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT3P12035 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT3P12035 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT3P12035 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT3P12035 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
KRT3P12035 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT3P12035 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
KRT3P12035 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KRT3P12035 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT3P12035 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
KRT3P12035 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT3P12035 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT3P12035 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT3P12035 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT3P12035 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT3P12035 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
KRT3P12035 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT3P12035 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT3P12035 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT3P12035 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT3P12035 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT3P12035 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
KRT3P12035 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT3P12035 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
KRT3P12035 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT3P12035 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
KRT3P12035 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT3P12035 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.43■□□□□ 0.38
KRT3P12035 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT3P12035 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT3P12035 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.43■□□□□ 0.38
KRT3P12035 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.43■□□□□ 0.38
KRT3P12035 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT3P12035 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
KRT3P12035 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT3P12035 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT3P12035 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
KRT3P12035 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT3P12035 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
KRT3P12035 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
KRT3P12035 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
KRT3P12035 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT3P12035 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
KRT3P12035 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
KRT3P12035 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT3P12035 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT3P12035 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.42■□□□□ 0.38
KRT3P12035 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT3P12035 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.42■□□□□ 0.38
KRT3P12035 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KRT3P12035 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 538.8 ms