Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.62■□□□□ 0.25
APOA4P06727 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.62■□□□□ 0.25
APOA4P06727 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
APOA4P06727 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.62■□□□□ 0.25
APOA4P06727 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
APOA4P06727 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
APOA4P06727 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
APOA4P06727 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
APOA4P06727 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
APOA4P06727 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
APOA4P06727 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.62■□□□□ 0.25
APOA4P06727 AC009947.1-201ENST00000444350 727 ntBASIC16.62■□□□□ 0.25
APOA4P06727 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.62■□□□□ 0.25
APOA4P06727 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.62■□□□□ 0.25
APOA4P06727 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.62■□□□□ 0.25
APOA4P06727 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.62■□□□□ 0.25
APOA4P06727 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.62■□□□□ 0.25
APOA4P06727 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.62■□□□□ 0.25
APOA4P06727 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.62■□□□□ 0.25
APOA4P06727 AC091167.2-201ENST00000579581 588 ntBASIC16.62■□□□□ 0.25
APOA4P06727 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.62■□□□□ 0.25
APOA4P06727 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.62■□□□□ 0.25
APOA4P06727 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.62■□□□□ 0.25
APOA4P06727 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.62■□□□□ 0.25
APOA4P06727 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
APOA4P06727 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.62■□□□□ 0.25
APOA4P06727 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
APOA4P06727 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.61■□□□□ 0.25
APOA4P06727 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.61■□□□□ 0.25
APOA4P06727 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOA4P06727 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOA4P06727 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOA4P06727 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOA4P06727 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.61■□□□□ 0.25
APOA4P06727 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOA4P06727 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APOA4P06727 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.61■□□□□ 0.25
APOA4P06727 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.61■□□□□ 0.25
APOA4P06727 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.61■□□□□ 0.25
APOA4P06727 Z83851.2-201ENST00000609564 659 ntBASIC16.61■□□□□ 0.25
APOA4P06727 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.61■□□□□ 0.25
APOA4P06727 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.61■□□□□ 0.25
APOA4P06727 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APOA4P06727 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.61■□□□□ 0.25
APOA4P06727 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.61■□□□□ 0.25
APOA4P06727 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
APOA4P06727 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
APOA4P06727 FLJ16779-201ENST00000612722 7638 ntBASIC16.61■□□□□ 0.25
APOA4P06727 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOA4P06727 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.61■□□□□ 0.25
APOA4P06727 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APOA4P06727 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOA4P06727 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOA4P06727 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOA4P06727 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOA4P06727 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
APOA4P06727 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOA4P06727 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOA4P06727 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOA4P06727 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.6■□□□□ 0.25
APOA4P06727 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APOA4P06727 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOA4P06727 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOA4P06727 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.6■□□□□ 0.25
APOA4P06727 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOA4P06727 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOA4P06727 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APOA4P06727 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.6■□□□□ 0.25
APOA4P06727 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOA4P06727 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOA4P06727 CRYGEP-201ENST00000412192 528 ntBASIC16.6■□□□□ 0.25
APOA4P06727 AL590627.1-203ENST00000421194 1026 ntBASIC16.6■□□□□ 0.25
APOA4P06727 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
APOA4P06727 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.6■□□□□ 0.25
APOA4P06727 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.6■□□□□ 0.25
APOA4P06727 AC107918.2-201ENST00000530817 355 ntBASIC16.6■□□□□ 0.25
APOA4P06727 AC005412.3-201ENST00000580309 715 ntBASIC16.6■□□□□ 0.25
APOA4P06727 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
APOA4P06727 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.6■□□□□ 0.25
APOA4P06727 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APOA4P06727 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.6■□□□□ 0.25
APOA4P06727 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms