Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PDGFAP04085 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
PDGFAP04085 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.53■□□□□ 0.08
PDGFAP04085 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 GK-202ENST00000378941 458 ntTSL 3 BASIC15.53■□□□□ 0.08
PDGFAP04085 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.53■□□□□ 0.08
PDGFAP04085 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.53■□□□□ 0.08
PDGFAP04085 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.53■□□□□ 0.08
PDGFAP04085 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
PDGFAP04085 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.53■□□□□ 0.08
PDGFAP04085 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.53■□□□□ 0.08
PDGFAP04085 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.53■□□□□ 0.08
PDGFAP04085 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.53■□□□□ 0.08
PDGFAP04085 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.53■□□□□ 0.08
PDGFAP04085 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.53■□□□□ 0.08
PDGFAP04085 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.53■□□□□ 0.08
PDGFAP04085 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PDGFAP04085 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PDGFAP04085 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 AC005052.1-201ENST00000625181 2492 ntBASIC15.53■□□□□ 0.08
PDGFAP04085 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PDGFAP04085 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PDGFAP04085 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.52■□□□□ 0.08
PDGFAP04085 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PDGFAP04085 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.52■□□□□ 0.08
PDGFAP04085 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDGFAP04085 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.52■□□□□ 0.08
PDGFAP04085 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PDGFAP04085 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDGFAP04085 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDGFAP04085 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.52■□□□□ 0.08
PDGFAP04085 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.52■□□□□ 0.08
PDGFAP04085 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PDGFAP04085 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDGFAP04085 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.52■□□□□ 0.08
PDGFAP04085 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PDGFAP04085 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDGFAP04085 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.52■□□□□ 0.08
PDGFAP04085 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PDGFAP04085 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
PDGFAP04085 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
PDGFAP04085 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PDGFAP04085 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.52■□□□□ 0.08
PDGFAP04085 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.52■□□□□ 0.08
PDGFAP04085 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.52■□□□□ 0.08
PDGFAP04085 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.52■□□□□ 0.08
PDGFAP04085 FAM207CP-201ENST00000443486 507 ntBASIC15.52■□□□□ 0.08
PDGFAP04085 AC097493.3-201ENST00000509725 367 ntBASIC15.52■□□□□ 0.08
PDGFAP04085 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.52■□□□□ 0.08
PDGFAP04085 AP005018.1-201ENST00000525475 301 ntBASIC15.52■□□□□ 0.08
PDGFAP04085 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.52■□□□□ 0.08
PDGFAP04085 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.52■□□□□ 0.08
PDGFAP04085 AC084121.4-201ENST00000641598 221 ntBASIC15.52■□□□□ 0.08
PDGFAP04085 AF228730.8-201ENST00000642140 221 ntBASIC15.52■□□□□ 0.08
PDGFAP04085 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.52■□□□□ 0.07
PDGFAP04085 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.52■□□□□ 0.07
PDGFAP04085 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PDGFAP04085 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.52■□□□□ 0.07
PDGFAP04085 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PDGFAP04085 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDGFAP04085 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
PDGFAP04085 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PDGFAP04085 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDGFAP04085 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDGFAP04085 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.51■□□□□ 0.07
PDGFAP04085 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms