Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDNEP1O95476 AC023274.1-201ENST00000418278 595 ntBASIC19.09■□□□□ 0.65
CTDNEP1O95476 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTDNEP1O95476 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 PGAM5P1-201ENST00000518923 814 ntBASIC19.09■□□□□ 0.65
CTDNEP1O95476 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDNEP1O95476 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDNEP1O95476 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDNEP1O95476 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTDNEP1O95476 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTDNEP1O95476 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDNEP1O95476 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.08■□□□□ 0.65
CTDNEP1O95476 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTDNEP1O95476 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTDNEP1O95476 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTDNEP1O95476 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.08■□□□□ 0.65
CTDNEP1O95476 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTDNEP1O95476 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
CTDNEP1O95476 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
CTDNEP1O95476 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CTDNEP1O95476 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTDNEP1O95476 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.08■□□□□ 0.65
CTDNEP1O95476 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.08■□□□□ 0.65
CTDNEP1O95476 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.08■□□□□ 0.65
CTDNEP1O95476 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTDNEP1O95476 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.08■□□□□ 0.65
CTDNEP1O95476 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTDNEP1O95476 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTDNEP1O95476 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.08■□□□□ 0.64
CTDNEP1O95476 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 MIR574-201ENST00000385209 96 ntBASIC19.08■□□□□ 0.64
CTDNEP1O95476 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CTDNEP1O95476 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.08■□□□□ 0.64
CTDNEP1O95476 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.08■□□□□ 0.64
CTDNEP1O95476 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.08■□□□□ 0.64
CTDNEP1O95476 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.08■□□□□ 0.64
CTDNEP1O95476 AL138918.1-201ENST00000568306 659 ntBASIC19.08■□□□□ 0.64
CTDNEP1O95476 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.08■□□□□ 0.64
CTDNEP1O95476 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.08■□□□□ 0.64
CTDNEP1O95476 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.08■□□□□ 0.64
CTDNEP1O95476 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.08■□□□□ 0.64
CTDNEP1O95476 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDNEP1O95476 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.08■□□□□ 0.64
CTDNEP1O95476 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.08■□□□□ 0.64
CTDNEP1O95476 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.08■□□□□ 0.64
CTDNEP1O95476 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CTDNEP1O95476 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDNEP1O95476 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDNEP1O95476 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTDNEP1O95476 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CTDNEP1O95476 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDNEP1O95476 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.07■□□□□ 0.64
CTDNEP1O95476 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTDNEP1O95476 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.07■□□□□ 0.64
CTDNEP1O95476 AP000347.1-202ENST00000435868 847 ntBASIC19.07■□□□□ 0.64
CTDNEP1O95476 KRT18P34-201ENST00000488218 1270 ntBASIC19.07■□□□□ 0.64
CTDNEP1O95476 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTDNEP1O95476 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.07■□□□□ 0.64
CTDNEP1O95476 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDNEP1O95476 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDNEP1O95476 AC069224.1-201ENST00000566372 1715 ntBASIC19.07■□□□□ 0.64
CTDNEP1O95476 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDNEP1O95476 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDNEP1O95476 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.07■□□□□ 0.64
CTDNEP1O95476 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTDNEP1O95476 LINC02447-202ENST00000501888 2146 ntBASIC19.07■□□□□ 0.64
CTDNEP1O95476 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTDNEP1O95476 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDNEP1O95476 WASH6P-202ENST00000359512 1437 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms