Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
BEST1O76090 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
BEST1O76090 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
BEST1O76090 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.3■□□□□ 0.36
BEST1O76090 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.3■□□□□ 0.36
BEST1O76090 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.3■□□□□ 0.36
BEST1O76090 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.3■□□□□ 0.36
BEST1O76090 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.3■□□□□ 0.36
BEST1O76090 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 AC069262.1-201ENST00000539058 672 ntBASIC17.3■□□□□ 0.36
BEST1O76090 AL512356.2-201ENST00000546955 174 ntBASIC17.3■□□□□ 0.36
BEST1O76090 RARRES2P9-201ENST00000565168 469 ntBASIC17.3■□□□□ 0.36
BEST1O76090 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.3■□□□□ 0.36
BEST1O76090 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.3■□□□□ 0.36
BEST1O76090 AC106028.4-201ENST00000614509 607 ntBASIC17.3■□□□□ 0.36
BEST1O76090 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.3■□□□□ 0.36
BEST1O76090 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.3■□□□□ 0.36
BEST1O76090 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.3■□□□□ 0.36
BEST1O76090 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.3■□□□□ 0.36
BEST1O76090 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 AL589702.1-201ENST00000641229 1509 ntBASIC17.3■□□□□ 0.36
BEST1O76090 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.3■□□□□ 0.36
BEST1O76090 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.3■□□□□ 0.36
BEST1O76090 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
BEST1O76090 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
BEST1O76090 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
BEST1O76090 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.29■□□□□ 0.36
BEST1O76090 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 AC098859.1-201ENST00000502915 1238 ntBASIC17.29■□□□□ 0.36
BEST1O76090 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.29■□□□□ 0.36
BEST1O76090 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.29■□□□□ 0.36
BEST1O76090 AC025678.2-201ENST00000562061 970 ntBASIC17.29■□□□□ 0.36
BEST1O76090 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.29■□□□□ 0.36
BEST1O76090 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.29■□□□□ 0.36
BEST1O76090 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.29■□□□□ 0.36
BEST1O76090 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.29■□□□□ 0.36
BEST1O76090 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.29■□□□□ 0.36
BEST1O76090 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST1O76090 AC099398.1-201ENST00000567919 2776 ntBASIC17.28■□□□□ 0.36
BEST1O76090 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.28■□□□□ 0.36
BEST1O76090 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
BEST1O76090 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
BEST1O76090 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 AC092364.2-201ENST00000596710 2692 ntBASIC17.28■□□□□ 0.36
BEST1O76090 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 AC084018.2-201ENST00000613093 2607 ntBASIC17.28■□□□□ 0.36
BEST1O76090 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
BEST1O76090 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.28■□□□□ 0.36
BEST1O76090 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.28■□□□□ 0.36
BEST1O76090 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.28■□□□□ 0.36
BEST1O76090 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.28■□□□□ 0.36
BEST1O76090 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.28■□□□□ 0.36
BEST1O76090 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.28■□□□□ 0.36
BEST1O76090 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST1O76090 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST1O76090 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST1O76090 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
BEST1O76090 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
BEST1O76090 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST1O76090 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms