Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 KRT18P34-201ENST00000488218 1270 ntBASIC14.79□□□□□ -0.04
CYTIPO60759 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.79□□□□□ -0.04
CYTIPO60759 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.79□□□□□ -0.04
CYTIPO60759 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.79□□□□□ -0.04
CYTIPO60759 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CYTIPO60759 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.79□□□□□ -0.04
CYTIPO60759 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.79□□□□□ -0.04
CYTIPO60759 AL135744.1-201ENST00000565098 629 ntBASIC14.79□□□□□ -0.04
CYTIPO60759 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CYTIPO60759 AC026120.1-201ENST00000611536 926 ntBASIC14.79□□□□□ -0.04
CYTIPO60759 AC020765.3-201ENST00000613051 740 ntBASIC14.79□□□□□ -0.04
CYTIPO60759 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CYTIPO60759 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CYTIPO60759 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CYTIPO60759 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CYTIPO60759 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CYTIPO60759 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CYTIPO60759 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CYTIPO60759 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CYTIPO60759 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CYTIPO60759 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 AGGF1P2-201ENST00000426656 2106 ntBASIC14.78□□□□□ -0.04
CYTIPO60759 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.78□□□□□ -0.04
CYTIPO60759 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CYTIPO60759 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CYTIPO60759 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 GPAA1P2-202ENST00000606848 1787 ntBASIC14.78□□□□□ -0.04
CYTIPO60759 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 GGT4P-201ENST00000623672 1708 ntBASIC14.78□□□□□ -0.04
CYTIPO60759 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.78□□□□□ -0.04
CYTIPO60759 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
CYTIPO60759 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CYTIPO60759 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CYTIPO60759 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CYTIPO60759 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 CICP6-201ENST00000457191 2729 ntBASIC14.78□□□□□ -0.04
CYTIPO60759 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
CYTIPO60759 AP006288.1-201ENST00000446065 395 ntBASIC14.78□□□□□ -0.04
CYTIPO60759 SPDYE11-202ENST00000450699 704 ntBASIC14.78□□□□□ -0.04
CYTIPO60759 AC004967.1-201ENST00000453589 447 ntBASIC14.78□□□□□ -0.04
CYTIPO60759 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 SPDYE9P-201ENST00000570642 692 ntBASIC14.78□□□□□ -0.04
CYTIPO60759 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.78□□□□□ -0.04
CYTIPO60759 SPDYE10P-202ENST00000612005 668 ntBASIC14.78□□□□□ -0.04
CYTIPO60759 SPDYE8P-202ENST00000612377 668 ntBASIC14.78□□□□□ -0.04
CYTIPO60759 AC006538.3-201ENST00000612495 578 ntBASIC14.78□□□□□ -0.04
CYTIPO60759 AC139530.3-201ENST00000620344 690 ntBASIC14.78□□□□□ -0.04
CYTIPO60759 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.78□□□□□ -0.04
CYTIPO60759 AC134684.3-201ENST00000641758 218 ntBASIC14.78□□□□□ -0.04
CYTIPO60759 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYTIPO60759 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.78□□□□□ -0.04
CYTIPO60759 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.77□□□□□ -0.04
CYTIPO60759 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CYTIPO60759 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CYTIPO60759 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CYTIPO60759 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
CYTIPO60759 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.77□□□□□ -0.04
CYTIPO60759 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CYTIPO60759 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CYTIPO60759 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.77□□□□□ -0.05
CYTIPO60759 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CYTIPO60759 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CYTIPO60759 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CYTIPO60759 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CYTIPO60759 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CYTIPO60759 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CYTIPO60759 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CYTIPO60759 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.77□□□□□ -0.05
CYTIPO60759 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.77□□□□□ -0.05
CYTIPO60759 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CYTIPO60759 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.77□□□□□ -0.05
CYTIPO60759 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CYTIPO60759 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.77□□□□□ -0.05
CYTIPO60759 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.77□□□□□ -0.05
CYTIPO60759 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
CYTIPO60759 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.77□□□□□ -0.05
CYTIPO60759 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms