Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 AP001350.2-201ENST00000625104 1094 ntBASIC16.41■□□□□ 0.22
PCDHGA12O60330 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 PCDHB19P-201ENST00000570871 2371 ntBASIC16.41■□□□□ 0.22
PCDHGA12O60330 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
PCDHGA12O60330 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGA12O60330 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PCDHGA12O60330 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA12O60330 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
PCDHGA12O60330 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGA12O60330 AC004890.2-204ENST00000481968 304 ntBASIC16.4■□□□□ 0.22
PCDHGA12O60330 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.4■□□□□ 0.22
PCDHGA12O60330 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA12O60330 CR383656.12-201ENST00000549567 513 ntBASIC16.4■□□□□ 0.22
PCDHGA12O60330 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGA12O60330 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGA12O60330 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 AGGF1P2-201ENST00000426656 2106 ntBASIC16.4■□□□□ 0.22
PCDHGA12O60330 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGA12O60330 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGA12O60330 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA12O60330 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 MIR4453-201ENST00000584019 89 ntBASIC16.39■□□□□ 0.21
PCDHGA12O60330 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 AC009118.2-201ENST00000613275 655 ntBASIC16.39■□□□□ 0.21
PCDHGA12O60330 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 SLC22A20-204ENST00000530038 1673 ntBASIC16.39■□□□□ 0.21
PCDHGA12O60330 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA12O60330 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA12O60330 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms