Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ATP2A1O14983 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ATP2A1O14983 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP2A1O14983 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A1O14983 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ATP2A1O14983 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A1O14983 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A1O14983 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ATP2A1O14983 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
ATP2A1O14983 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ATP2A1O14983 AL589702.1-201ENST00000641229 1509 ntBASIC18.85■□□□□ 0.61
ATP2A1O14983 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A1O14983 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ATP2A1O14983 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A1O14983 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP2A1O14983 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP2A1O14983 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ATP2A1O14983 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A1O14983 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP2A1O14983 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A1O14983 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A1O14983 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ATP2A1O14983 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP2A1O14983 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP2A1O14983 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.85■□□□□ 0.61
ATP2A1O14983 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ATP2A1O14983 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP2A1O14983 PIN1P1-201ENST00000412108 996 ntBASIC18.85■□□□□ 0.61
ATP2A1O14983 AL080243.2-201ENST00000418783 582 ntBASIC18.85■□□□□ 0.61
ATP2A1O14983 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.85■□□□□ 0.61
ATP2A1O14983 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.85■□□□□ 0.61
ATP2A1O14983 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.85■□□□□ 0.61
ATP2A1O14983 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.85■□□□□ 0.61
ATP2A1O14983 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP2A1O14983 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP2A1O14983 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A1O14983 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A1O14983 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A1O14983 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A1O14983 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A1O14983 AL031731.1-201ENST00000642131 2094 ntBASIC18.85■□□□□ 0.61
ATP2A1O14983 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP2A1O14983 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ATP2A1O14983 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ATP2A1O14983 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ATP2A1O14983 AC063926.2-201ENST00000623766 1308 ntBASIC18.84■□□□□ 0.61
ATP2A1O14983 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
ATP2A1O14983 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
ATP2A1O14983 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP2A1O14983 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.84■□□□□ 0.61
ATP2A1O14983 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.84■□□□□ 0.61
ATP2A1O14983 HLA-J-202ENST00000469281 1241 ntBASIC18.84■□□□□ 0.61
ATP2A1O14983 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP2A1O14983 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.84■□□□□ 0.61
ATP2A1O14983 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.84■□□□□ 0.61
ATP2A1O14983 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.84■□□□□ 0.61
ATP2A1O14983 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.84■□□□□ 0.61
ATP2A1O14983 AL079307.3-201ENST00000556114 283 ntBASIC18.84■□□□□ 0.61
ATP2A1O14983 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.84■□□□□ 0.61
ATP2A1O14983 AC061975.2-201ENST00000581722 295 ntBASIC18.84■□□□□ 0.61
ATP2A1O14983 AC024267.1-201ENST00000582320 895 ntBASIC18.84■□□□□ 0.61
ATP2A1O14983 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP2A1O14983 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ATP2A1O14983 AC012645.4-201ENST00000610691 1061 ntBASIC18.84■□□□□ 0.61
ATP2A1O14983 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ATP2A1O14983 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ATP2A1O14983 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ATP2A1O14983 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A1O14983 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP2A1O14983 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
ATP2A1O14983 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2A1O14983 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2A1O14983 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2A1O14983 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2A1O14983 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.83■□□□□ 0.61
ATP2A1O14983 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2A1O14983 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2A1O14983 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms