Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC060834.1-201ENST00000443027 2032 ntBASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC069335.1-201ENST00000489972 472 ntBASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 AL512356.2-201ENST00000546955 174 ntBASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 RARRES2P8-201ENST00000566335 367 ntBASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMX2-CTNND1H3BSU7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC099522.2-201ENST00000607001 744 ntBASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 REXO1L11P-201ENST00000620964 1927 ntBASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMX2-CTNND1H3BSU7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC005052.1-201ENST00000625181 2492 ntBASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 KRT18P32-201ENST00000424695 1287 ntBASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 COX20P2-201ENST00000452636 358 ntBASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 KRT8P23-201ENST00000560090 1207 ntBASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.28■□□□□ 0.2
TMX2-CTNND1H3BSU7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms