Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.83■□□□□ 0.28
CCDC78A2IDD5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 AL031731.1-201ENST00000642131 2094 ntBASIC16.82■□□□□ 0.28
CCDC78A2IDD5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 AL353732.1-201ENST00000569618 1459 ntBASIC16.82■□□□□ 0.28
CCDC78A2IDD5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.82■□□□□ 0.28
CCDC78A2IDD5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 AC091167.2-201ENST00000579581 588 ntBASIC16.82■□□□□ 0.28
CCDC78A2IDD5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 PGM5P2-202ENST00000637225 1043 ntBASIC16.82■□□□□ 0.28
CCDC78A2IDD5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CCDC78A2IDD5 PCDHA1-201ENST00000378133 2726 ntBASIC16.82■□□□□ 0.28
CCDC78A2IDD5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 AC129492.6-201ENST00000611383 1305 ntBASIC16.81■□□□□ 0.28
CCDC78A2IDD5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.81■□□□□ 0.28
CCDC78A2IDD5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC78A2IDD5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms