Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 AC026691.1-201ENST00000602502 2017 ntBASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.46■□□□□ 0.7
PTPDC1A2A3K4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 HCG4-201ENST00000418983 998 ntBASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPDC1A2A3K4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 AP000344.2-201ENST00000512987 629 ntBASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 AP001350.2-201ENST00000625104 1094 ntBASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 AL645728.2-201ENST00000641974 660 ntBASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
PTPDC1A2A3K4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms