Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 RNU1-129P-201ENST00000384064 167 ntBASIC18.9■□□□□ 0.62
CLIC4Q9Y696 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 VN2R19P-201ENST00000442399 1052 ntBASIC18.9■□□□□ 0.62
CLIC4Q9Y696 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 AL513480.1-201ENST00000451731 511 ntBASIC18.9■□□□□ 0.62
CLIC4Q9Y696 AC009078.2-202ENST00000463353 338 ntBASIC18.9■□□□□ 0.62
CLIC4Q9Y696 RNA5SP415-201ENST00000517246 115 ntBASIC18.9■□□□□ 0.62
CLIC4Q9Y696 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 IGHV3-22-201ENST00000520721 359 ntBASIC18.9■□□□□ 0.62
CLIC4Q9Y696 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 U1.21-201ENST00000580816 167 ntBASIC18.9■□□□□ 0.62
CLIC4Q9Y696 SLC25A6P4-201ENST00000586535 553 ntBASIC18.9■□□□□ 0.62
CLIC4Q9Y696 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CLIC4Q9Y696 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.89■□□□□ 0.62
CLIC4Q9Y696 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 AC020765.3-201ENST00000613051 740 ntBASIC18.89■□□□□ 0.61
CLIC4Q9Y696 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.89■□□□□ 0.61
CLIC4Q9Y696 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 HCG4B-203ENST00000450128 991 ntBASIC18.88■□□□□ 0.61
CLIC4Q9Y696 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms