Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 VENTXP5-201ENST00000523979 775 ntBASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 AC011840.4-201ENST00000578471 627 ntBASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 AC012313.10-201ENST00000623509 926 ntBASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 CDC14C-201ENST00000428251 1719 ntBASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGB1Q9Y5G3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 KLF4P1-201ENST00000412782 1185 ntBASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 RNF126P1-202ENST00000569893 925 ntBASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 AC013467.2-201ENST00000605472 835 ntBASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms