Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC009407.1-201ENST00000568958 598 ntBASIC17.19■□□□□ 0.34
YIPF1Q9Y548 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
YIPF1Q9Y548 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 AC005034.1-201ENST00000426657 489 ntBASIC17.18■□□□□ 0.34
YIPF1Q9Y548 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 SPTLC1P1-201ENST00000447199 261 ntBASIC17.18■□□□□ 0.34
YIPF1Q9Y548 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 AC005225.4-201ENST00000557330 545 ntBASIC17.18■□□□□ 0.34
YIPF1Q9Y548 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 AL035252.4-201ENST00000624174 288 ntBASIC17.18■□□□□ 0.34
YIPF1Q9Y548 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 PCGF3-213ENST00000620529 1899 ntBASIC17.18■□□□□ 0.34
YIPF1Q9Y548 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YIPF1Q9Y548 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 PIN1P1-201ENST00000412108 996 ntBASIC17.17■□□□□ 0.34
YIPF1Q9Y548 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 AC004233.3-201ENST00000607794 1269 ntBASIC17.17■□□□□ 0.34
YIPF1Q9Y548 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YIPF1Q9Y548 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms