Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PAWRP1-201ENST00000451083 565 ntBASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 AC073648.2-201ENST00000510116 352 ntBASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 OR7E14P-202ENST00000530490 1290 ntBASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 AC006557.2-201ENST00000592985 1240 ntBASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 TP73-AS1-207ENST00000624167 988 ntBASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 FAM197Y8-203ENST00000450145 560 ntBASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 AL121912.1-201ENST00000603683 238 ntBASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 AC013467.2-201ENST00000605472 835 ntBASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
RHBDD3Q9Y3P4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RHBDD3Q9Y3P4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms