Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 NORAD-201ENST00000565493 5339 ntBASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 LINC01144-201ENST00000626198 1710 ntBASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 AC016734.2-201ENST00000624325 1377 ntBASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 DBET-201ENST00000630918 3363 ntBASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 DRAXINP1-201ENST00000437611 948 ntBASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 MPDU1-223ENST00000582151 728 ntBASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 AC144831.1-201ENST00000573312 2656 ntBASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 CDC14C-201ENST00000428251 1719 ntBASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 AC022532.1-201ENST00000624563 1728 ntBASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
UBE2D4Q9Y2X8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 LINC02447-202ENST00000501888 2146 ntBASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 POM121L3P-201ENST00000419331 1163 ntBASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms