Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 RNF126P1-202ENST00000569893 925 ntBASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RCL1Q9Y2P8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 PPT1-215ENST00000641471 2368 ntBASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 KRT8P49-201ENST00000604166 1432 ntBASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RCL1Q9Y2P8 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 AL671710.1-201ENST00000610245 2349 ntBASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 LINC01568-207ENST00000641790 1380 ntBASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 CDC14C-201ENST00000428251 1719 ntBASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms