Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
ZC3H4Q9UPT8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 AL442647.2-201ENST00000429864 857 ntBASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.83■□□□□ 0.77
ZC3H4Q9UPT8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZC3H4Q9UPT8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 AC005229.1-201ENST00000392885 409 ntBASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 AC007551.1-201ENST00000457394 519 ntBASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 TIMM17BP1-201ENST00000545713 516 ntBASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 AC012313.1-201ENST00000593393 3059 ntBASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ZC3H4Q9UPT8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms