Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
UBQLN1Q9UMX0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 KLF2P3-201ENST00000451977 1087 ntBASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 AC018529.1-201ENST00000613063 361 ntBASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 UBALD1-205ENST00000590891 2641 ntBASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN1Q9UMX0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN1Q9UMX0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 AD000864.1-201ENST00000624076 2295 ntBASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 HMGN1P19-201ENST00000436976 333 ntBASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 AC125807.1-201ENST00000483097 614 ntBASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
UBQLN1Q9UMX0 AL589702.1-201ENST00000641229 1509 ntBASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms