Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 LAGE3P1-201ENST00000425356 484 ntBASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 AC093909.1-201ENST00000504731 1122 ntBASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 AC243591.1-201ENST00000452967 1364 ntBASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT11Q9UKZ1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT11Q9UKZ1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT11Q9UKZ1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT11Q9UKZ1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.96■□□□□ 0.14
CNOT11Q9UKZ1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT11Q9UKZ1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT11Q9UKZ1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 AC012640.2-201ENST00000561606 901 ntBASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 AL589182.2-201ENST00000619332 1049 ntBASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 AC008735.5-201ENST00000623544 497 ntBASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT11Q9UKZ1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms