Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 TUBB8P12-201ENST00000308911 1335 ntBASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 TUBB7P-202ENST00000428444 1305 ntBASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 TUBB8P7-204ENST00000567960 1332 ntBASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 PMS2P4-201ENST00000412466 1052 ntBASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 AC005237.2-201ENST00000434368 219 ntBASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 AC093028.1-201ENST00000622998 982 ntBASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLIP2Q9UDT6 AC008741.2-201ENST00000612792 3115 ntBASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 AL645939.2-201ENST00000427340 991 ntBASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 RN7SL589P-201ENST00000481268 310 ntBASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 AC004449.1-201ENST00000564240 433 ntBASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 AL355385.1-201ENST00000606123 409 ntBASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLIP2Q9UDT6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 AC005915.1-201ENST00000624912 2018 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms