Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 AC010491.1-201ENST00000563101 2797 ntBASIC15.48■□□□□ 0.07
RLIMQ9NVW2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.47■□□□□ 0.07
RLIMQ9NVW2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 AL121912.1-201ENST00000603683 238 ntBASIC15.47■□□□□ 0.07
RLIMQ9NVW2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RLIMQ9NVW2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 AL512652.2-201ENST00000625156 1716 ntBASIC15.46■□□□□ 0.07
RLIMQ9NVW2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 AC079781.3-201ENST00000449110 356 ntBASIC15.46■□□□□ 0.07
RLIMQ9NVW2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 AC136632.2-201ENST00000512891 861 ntBASIC15.46■□□□□ 0.07
RLIMQ9NVW2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 AC012640.2-201ENST00000561606 901 ntBASIC15.46■□□□□ 0.07
RLIMQ9NVW2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 MIR4492-201ENST00000581627 80 ntBASIC15.46■□□□□ 0.07
RLIMQ9NVW2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 AL691432.3-201ENST00000621860 400 ntBASIC15.46■□□□□ 0.07
RLIMQ9NVW2 AC148477.8-201ENST00000624298 468 ntBASIC15.46■□□□□ 0.07
RLIMQ9NVW2 AL139011.1-202ENST00000642063 584 ntBASIC15.46■□□□□ 0.07
RLIMQ9NVW2 SLC22A20-204ENST00000530038 1673 ntBASIC15.46■□□□□ 0.07
RLIMQ9NVW2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.46■□□□□ 0.07
RLIMQ9NVW2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RLIMQ9NVW2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
RLIMQ9NVW2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
RLIMQ9NVW2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
RLIMQ9NVW2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RLIMQ9NVW2 AL603832.2-201ENST00000566195 2125 ntBASIC15.46■□□□□ 0.06
RLIMQ9NVW2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RLIMQ9NVW2 AC131009.4-201ENST00000624048 1740 ntBASIC15.46■□□□□ 0.06
RLIMQ9NVW2 PKD1P5-201ENST00000532415 10291 ntBASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms