Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HIPK3Q9H422 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HIPK3Q9H422 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 TMEM14DP-201ENST00000422205 345 ntBASIC17.97■□□□□ 0.47
HIPK3Q9H422 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.97■□□□□ 0.47
HIPK3Q9H422 AC234783.1-201ENST00000441761 496 ntBASIC17.97■□□□□ 0.47
HIPK3Q9H422 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.97■□□□□ 0.47
HIPK3Q9H422 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.97■□□□□ 0.47
HIPK3Q9H422 AC124947.2-201ENST00000547118 1133 ntBASIC17.97■□□□□ 0.47
HIPK3Q9H422 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.97■□□□□ 0.47
HIPK3Q9H422 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.97■□□□□ 0.47
HIPK3Q9H422 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.97■□□□□ 0.47
HIPK3Q9H422 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.97■□□□□ 0.47
HIPK3Q9H422 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 PRORSD1P-202ENST00000563365 2154 ntBASIC17.97■□□□□ 0.47
HIPK3Q9H422 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.97■□□□□ 0.47
HIPK3Q9H422 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.97■□□□□ 0.47
HIPK3Q9H422 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK3Q9H422 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK3Q9H422 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK3Q9H422 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 AC139713.2-201ENST00000641328 2723 ntBASIC17.96■□□□□ 0.47
HIPK3Q9H422 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK3Q9H422 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK3Q9H422 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK3Q9H422 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK3Q9H422 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK3Q9H422 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 MIR4259-201ENST00000584466 101 ntBASIC17.96■□□□□ 0.47
HIPK3Q9H422 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 AL109936.8-201ENST00000641772 604 ntBASIC17.96■□□□□ 0.47
HIPK3Q9H422 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK3Q9H422 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK3Q9H422 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HIPK3Q9H422 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HIPK3Q9H422 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIPK3Q9H422 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 LINC02012-201ENST00000608206 1725 ntBASIC17.95■□□□□ 0.46
HIPK3Q9H422 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIPK3Q9H422 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIPK3Q9H422 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIPK3Q9H422 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIPK3Q9H422 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIPK3Q9H422 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIPK3Q9H422 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIPK3Q9H422 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIPK3Q9H422 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIPK3Q9H422 SPDYE17-201ENST00000412399 783 ntBASIC17.95■□□□□ 0.46
HIPK3Q9H422 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 AL589987.1-201ENST00000453380 819 ntBASIC17.95■□□□□ 0.46
HIPK3Q9H422 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIPK3Q9H422 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIPK3Q9H422 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIPK3Q9H422 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 AC093726.1-201ENST00000608064 963 ntBASIC17.95■□□□□ 0.46
HIPK3Q9H422 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.95■□□□□ 0.46
HIPK3Q9H422 AL033527.4-201ENST00000641026 673 ntBASIC17.95■□□□□ 0.46
HIPK3Q9H422 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms