Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 HES2-202ENST00000377836 507 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 COX5BP2-201ENST00000392354 334 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 FAM197Y1-201ENST00000421178 764 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AC026271.2-201ENST00000428091 497 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 MIR3917-201ENST00000580971 93 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AC024563.2-201ENST00000603282 481 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CD177P1-201ENST00000606252 935 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AC024243.1-201ENST00000609234 778 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AL023803.3-201ENST00000615559 522 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AC005786.4-201ENST00000623369 682 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 FRMD8P1-201ENST00000440433 1524 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CSPG4P11-201ENST00000560634 4910 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AC010491.1-201ENST00000563101 2797 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AL603832.2-201ENST00000566195 2125 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AC002310.6-201ENST00000624451 1377 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms