Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN18Q99952 BCRP6-201ENST00000510112 632 ntBASIC18.71■□□□□ 0.59
PTPN18Q99952 BCRP7-201ENST00000511549 544 ntBASIC18.71■□□□□ 0.59
PTPN18Q99952 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PTPN18Q99952 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.71■□□□□ 0.59
PTPN18Q99952 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN18Q99952 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN18Q99952 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.71■□□□□ 0.59
PTPN18Q99952 LINC01115-203ENST00000606068 577 ntBASIC18.71■□□□□ 0.59
PTPN18Q99952 AL022328.1-201ENST00000610050 478 ntBASIC18.71■□□□□ 0.59
PTPN18Q99952 AC020765.3-201ENST00000613051 740 ntBASIC18.71■□□□□ 0.59
PTPN18Q99952 AL139099.5-201ENST00000635274 300 ntBASIC18.71■□□□□ 0.59
PTPN18Q99952 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN18Q99952 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.71■□□□□ 0.59
PTPN18Q99952 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.71■□□□□ 0.58
PTPN18Q99952 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN18Q99952 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN18Q99952 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PTPN18Q99952 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN18Q99952 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTPN18Q99952 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PTPN18Q99952 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN18Q99952 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN18Q99952 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN18Q99952 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN18Q99952 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN18Q99952 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN18Q99952 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN18Q99952 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN18Q99952 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTPN18Q99952 RPL7P3-201ENST00000441388 714 ntBASIC18.7■□□□□ 0.58
PTPN18Q99952 GOLGA2P4-201ENST00000441462 777 ntBASIC18.7■□□□□ 0.58
PTPN18Q99952 AC007551.1-201ENST00000457394 519 ntBASIC18.7■□□□□ 0.58
PTPN18Q99952 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTPN18Q99952 TDH-203ENST00000531764 1110 ntBASIC18.7■□□□□ 0.58
PTPN18Q99952 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTPN18Q99952 MIR3615-201ENST00000581999 87 ntBASIC18.7■□□□□ 0.58
PTPN18Q99952 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN18Q99952 AL139011.1-202ENST00000642063 584 ntBASIC18.7■□□□□ 0.58
PTPN18Q99952 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN18Q99952 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN18Q99952 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN18Q99952 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN18Q99952 Z97205.2-201ENST00000564697 1639 ntBASIC18.7■□□□□ 0.58
PTPN18Q99952 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN18Q99952 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN18Q99952 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PTPN18Q99952 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN18Q99952 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN18Q99952 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN18Q99952 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PTPN18Q99952 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PTPN18Q99952 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PTPN18Q99952 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 CYP4F24P-201ENST00000586049 1580 ntBASIC18.69■□□□□ 0.58
PTPN18Q99952 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN18Q99952 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
PTPN18Q99952 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN18Q99952 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PTPN18Q99952 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 AL442647.2-201ENST00000429864 857 ntBASIC18.69■□□□□ 0.58
PTPN18Q99952 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.69■□□□□ 0.58
PTPN18Q99952 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.69■□□□□ 0.58
PTPN18Q99952 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN18Q99952 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN18Q99952 AC133539.2-201ENST00000604757 467 ntBASIC18.69■□□□□ 0.58
PTPN18Q99952 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN18Q99952 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PTPN18Q99952 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN18Q99952 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN18Q99952 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PTPN18Q99952 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN18Q99952 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PTPN18Q99952 GPAA1P2-202ENST00000606848 1787 ntBASIC18.68■□□□□ 0.58
PTPN18Q99952 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms