Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGREF1Q99674 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGREF1Q99674 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGREF1Q99674 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.79■□□□□ 0.12
CGREF1Q99674 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CGREF1Q99674 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CGREF1Q99674 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CGREF1Q99674 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CGREF1Q99674 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CGREF1Q99674 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.79■□□□□ 0.12
CGREF1Q99674 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CGREF1Q99674 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CGREF1Q99674 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 AL591684.3-201ENST00000605187 298 ntBASIC15.79■□□□□ 0.12
CGREF1Q99674 AL139424.1-201ENST00000607572 797 ntBASIC15.79■□□□□ 0.12
CGREF1Q99674 AP001269.4-201ENST00000609611 512 ntBASIC15.79■□□□□ 0.12
CGREF1Q99674 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 REXO1L8P-201ENST00000604378 1897 ntBASIC15.79■□□□□ 0.12
CGREF1Q99674 PCGF3-213ENST00000620529 1899 ntBASIC15.79■□□□□ 0.12
CGREF1Q99674 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CGREF1Q99674 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CGREF1Q99674 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CGREF1Q99674 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CGREF1Q99674 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CGREF1Q99674 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CGREF1Q99674 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CGREF1Q99674 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.79■□□□□ 0.12
CGREF1Q99674 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
CGREF1Q99674 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.78■□□□□ 0.12
CGREF1Q99674 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CGREF1Q99674 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 GPAA1P2-202ENST00000606848 1787 ntBASIC15.78■□□□□ 0.12
CGREF1Q99674 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.78■□□□□ 0.12
CGREF1Q99674 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 LINC01144-201ENST00000626198 1710 ntBASIC15.78■□□□□ 0.12
CGREF1Q99674 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CGREF1Q99674 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CGREF1Q99674 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 REXO1L3P-201ENST00000622202 1288 ntBASIC15.78■□□□□ 0.12
CGREF1Q99674 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
CGREF1Q99674 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CGREF1Q99674 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CGREF1Q99674 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.78■□□□□ 0.12
CGREF1Q99674 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CGREF1Q99674 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.78■□□□□ 0.12
CGREF1Q99674 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.77■□□□□ 0.12
CGREF1Q99674 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CGREF1Q99674 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CGREF1Q99674 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CGREF1Q99674 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CGREF1Q99674 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CGREF1Q99674 AC131009.4-201ENST00000624048 1740 ntBASIC15.77■□□□□ 0.12
CGREF1Q99674 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
CGREF1Q99674 IER3-202ENST00000376377 1350 ntBASIC15.77■□□□□ 0.12
CGREF1Q99674 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CGREF1Q99674 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CGREF1Q99674 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CGREF1Q99674 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CGREF1Q99674 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CGREF1Q99674 AP005117.1-202ENST00000581724 1908 ntBASIC15.77■□□□□ 0.12
CGREF1Q99674 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.77■□□□□ 0.12
CGREF1Q99674 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms