Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ANKRD19P-201ENST00000338192 862 ntBASIC17.03■□□□□ 0.32
CDCA3Q99618 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.03■□□□□ 0.32
CDCA3Q99618 AL442647.2-201ENST00000429864 857 ntBASIC17.03■□□□□ 0.32
CDCA3Q99618 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDCA3Q99618 AL162726.2-201ENST00000438986 1017 ntBASIC17.03■□□□□ 0.32
CDCA3Q99618 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.03■□□□□ 0.32
CDCA3Q99618 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.03■□□□□ 0.32
CDCA3Q99618 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDCA3Q99618 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDCA3Q99618 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDCA3Q99618 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.03■□□□□ 0.32
CDCA3Q99618 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.03■□□□□ 0.32
CDCA3Q99618 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CDCA3Q99618 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.03■□□□□ 0.32
CDCA3Q99618 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDCA3Q99618 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDCA3Q99618 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.03■□□□□ 0.32
CDCA3Q99618 AC092053.1-201ENST00000605787 1936 ntBASIC17.03■□□□□ 0.32
CDCA3Q99618 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDCA3Q99618 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.03■□□□□ 0.32
CDCA3Q99618 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDCA3Q99618 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDCA3Q99618 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDCA3Q99618 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDCA3Q99618 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.02■□□□□ 0.32
CDCA3Q99618 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.02■□□□□ 0.32
CDCA3Q99618 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDCA3Q99618 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDCA3Q99618 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.02■□□□□ 0.32
CDCA3Q99618 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CDCA3Q99618 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDCA3Q99618 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDCA3Q99618 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDCA3Q99618 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDCA3Q99618 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDCA3Q99618 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDCA3Q99618 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.02■□□□□ 0.32
CDCA3Q99618 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.02■□□□□ 0.32
CDCA3Q99618 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDCA3Q99618 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.02■□□□□ 0.32
CDCA3Q99618 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDCA3Q99618 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDCA3Q99618 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDCA3Q99618 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDCA3Q99618 HIST3H2BA-201ENST00000436555 524 ntBASIC17.02■□□□□ 0.32
CDCA3Q99618 RN7SL399P-201ENST00000471648 279 ntBASIC17.02■□□□□ 0.32
CDCA3Q99618 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.02■□□□□ 0.32
CDCA3Q99618 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CDCA3Q99618 AC036164.1-201ENST00000570544 333 ntBASIC17.02■□□□□ 0.32
CDCA3Q99618 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.02■□□□□ 0.32
CDCA3Q99618 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.02■□□□□ 0.32
CDCA3Q99618 AC084346.2-201ENST00000607097 949 ntBASIC17.02■□□□□ 0.32
CDCA3Q99618 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDCA3Q99618 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.02■□□□□ 0.31
CDCA3Q99618 PCDHB17P-201ENST00000539533 2393 ntBASIC17.02■□□□□ 0.31
CDCA3Q99618 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CDCA3Q99618 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDCA3Q99618 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDCA3Q99618 AC018665.1-201ENST00000622927 1362 ntBASIC17.02■□□□□ 0.31
CDCA3Q99618 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDCA3Q99618 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDCA3Q99618 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.01■□□□□ 0.31
CDCA3Q99618 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.01■□□□□ 0.31
CDCA3Q99618 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDCA3Q99618 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.01■□□□□ 0.31
CDCA3Q99618 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.01■□□□□ 0.31
CDCA3Q99618 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 Z97205.2-201ENST00000564697 1639 ntBASIC17.01■□□□□ 0.31
CDCA3Q99618 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDCA3Q99618 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDCA3Q99618 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.01■□□□□ 0.31
CDCA3Q99618 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.01■□□□□ 0.31
CDCA3Q99618 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CDCA3Q99618 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 KLF2P4-201ENST00000451959 1225 ntBASIC17.01■□□□□ 0.31
CDCA3Q99618 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.01■□□□□ 0.31
CDCA3Q99618 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.01■□□□□ 0.31
CDCA3Q99618 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.01■□□□□ 0.31
CDCA3Q99618 SLC25A47P1-201ENST00000531577 414 ntBASIC17.01■□□□□ 0.31
CDCA3Q99618 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.01■□□□□ 0.31
CDCA3Q99618 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.01■□□□□ 0.31
CDCA3Q99618 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.01■□□□□ 0.31
CDCA3Q99618 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.01■□□□□ 0.31
CDCA3Q99618 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.01■□□□□ 0.31
CDCA3Q99618 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDCA3Q99618 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.01■□□□□ 0.31
CDCA3Q99618 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms