Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.94□□□□□ -0.34
TRGV9Q99603 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRGV9Q99603 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRGV9Q99603 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 AC129492.6-201ENST00000611383 1305 ntBASIC12.94□□□□□ -0.34
TRGV9Q99603 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRGV9Q99603 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRGV9Q99603 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.94□□□□□ -0.34
TRGV9Q99603 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.94□□□□□ -0.34
TRGV9Q99603 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.94□□□□□ -0.34
TRGV9Q99603 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRGV9Q99603 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.94□□□□□ -0.34
TRGV9Q99603 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.94□□□□□ -0.34
TRGV9Q99603 FGFR3P6-201ENST00000457012 610 ntBASIC12.94□□□□□ -0.34
TRGV9Q99603 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.94□□□□□ -0.34
TRGV9Q99603 SART3-203ENST00000546611 1184 ntBASIC12.94□□□□□ -0.34
TRGV9Q99603 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.94□□□□□ -0.34
TRGV9Q99603 AC008608.2-201ENST00000606089 416 ntBASIC12.94□□□□□ -0.34
TRGV9Q99603 AL121772.3-201ENST00000610840 674 ntBASIC12.94□□□□□ -0.34
TRGV9Q99603 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.94□□□□□ -0.34
TRGV9Q99603 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 GGTLC5P-201ENST00000617623 998 ntBASIC12.94□□□□□ -0.34
TRGV9Q99603 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.94□□□□□ -0.34
TRGV9Q99603 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.94□□□□□ -0.34
TRGV9Q99603 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 PAUPAR-201ENST00000630360 2965 ntBASIC12.94□□□□□ -0.34
TRGV9Q99603 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.94□□□□□ -0.34
TRGV9Q99603 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.94□□□□□ -0.34
TRGV9Q99603 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.94□□□□□ -0.34
TRGV9Q99603 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV9Q99603 AC063926.3-201ENST00000624734 5658 ntBASIC12.93□□□□□ -0.34
TRGV9Q99603 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.93□□□□□ -0.34
TRGV9Q99603 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.93□□□□□ -0.34
TRGV9Q99603 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 AC132872.4-202ENST00000622924 2756 ntBASIC12.93□□□□□ -0.34
TRGV9Q99603 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.93□□□□□ -0.34
TRGV9Q99603 REXO1L8P-201ENST00000604378 1897 ntBASIC12.93□□□□□ -0.34
TRGV9Q99603 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.93□□□□□ -0.34
TRGV9Q99603 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRGV9Q99603 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.93□□□□□ -0.34
TRGV9Q99603 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRGV9Q99603 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRGV9Q99603 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRGV9Q99603 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.93□□□□□ -0.34
TRGV9Q99603 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRGV9Q99603 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
TRGV9Q99603 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.93□□□□□ -0.34
TRGV9Q99603 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 MIR648-201ENST00000385046 94 ntBASIC12.93□□□□□ -0.34
TRGV9Q99603 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.93□□□□□ -0.34
TRGV9Q99603 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRGV9Q99603 ELK2BP-201ENST00000415014 1224 ntBASIC12.93□□□□□ -0.34
TRGV9Q99603 LAGE3P1-201ENST00000425356 484 ntBASIC12.93□□□□□ -0.34
TRGV9Q99603 AC107918.2-201ENST00000530817 355 ntBASIC12.93□□□□□ -0.34
TRGV9Q99603 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.93□□□□□ -0.34
TRGV9Q99603 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.93□□□□□ -0.34
TRGV9Q99603 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
TRGV9Q99603 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.93□□□□□ -0.34
TRGV9Q99603 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.93□□□□□ -0.34
TRGV9Q99603 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.93□□□□□ -0.34
TRGV9Q99603 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRGV9Q99603 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.93□□□□□ -0.34
TRGV9Q99603 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.93□□□□□ -0.34
TRGV9Q99603 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TRGV9Q99603 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TRGV9Q99603 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRGV9Q99603 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV9Q99603 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TRGV9Q99603 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms