Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 AC002310.6-201ENST00000624451 1377 ntBASIC13.72□□□□□ -0.21
S1PR3Q99500 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
S1PR3Q99500 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
S1PR3Q99500 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
S1PR3Q99500 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
S1PR3Q99500 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.72□□□□□ -0.21
S1PR3Q99500 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.72□□□□□ -0.21
S1PR3Q99500 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.72□□□□□ -0.21
S1PR3Q99500 AL031284.1-201ENST00000419297 478 ntBASIC13.72□□□□□ -0.21
S1PR3Q99500 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.72□□□□□ -0.21
S1PR3Q99500 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
S1PR3Q99500 HNRNPDP1-201ENST00000439535 754 ntBASIC13.72□□□□□ -0.21
S1PR3Q99500 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
S1PR3Q99500 RPS15P9-201ENST00000494093 319 ntBASIC13.72□□□□□ -0.21
S1PR3Q99500 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.72□□□□□ -0.21
S1PR3Q99500 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.72□□□□□ -0.21
S1PR3Q99500 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.72□□□□□ -0.21
S1PR3Q99500 MPDU1-223ENST00000582151 728 ntBASIC13.72□□□□□ -0.21
S1PR3Q99500 AC008735.5-201ENST00000623544 497 ntBASIC13.72□□□□□ -0.21
S1PR3Q99500 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
S1PR3Q99500 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.72□□□□□ -0.21
S1PR3Q99500 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.72□□□□□ -0.21
S1PR3Q99500 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.72□□□□□ -0.21
S1PR3Q99500 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
S1PR3Q99500 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.71□□□□□ -0.21
S1PR3Q99500 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
S1PR3Q99500 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.71□□□□□ -0.21
S1PR3Q99500 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.71□□□□□ -0.21
S1PR3Q99500 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.71□□□□□ -0.21
S1PR3Q99500 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 AC129492.6-201ENST00000611383 1305 ntBASIC13.71□□□□□ -0.21
S1PR3Q99500 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.71□□□□□ -0.21
S1PR3Q99500 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
S1PR3Q99500 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 ALOX12P2-203ENST00000570921 1945 ntBASIC13.71□□□□□ -0.21
S1PR3Q99500 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.71□□□□□ -0.21
S1PR3Q99500 MRPL3P1-201ENST00000400109 1033 ntBASIC13.71□□□□□ -0.21
S1PR3Q99500 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.71□□□□□ -0.21
S1PR3Q99500 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.71□□□□□ -0.21
S1PR3Q99500 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 AC093909.1-201ENST00000504731 1122 ntBASIC13.71□□□□□ -0.21
S1PR3Q99500 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.71□□□□□ -0.21
S1PR3Q99500 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.71□□□□□ -0.21
S1PR3Q99500 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.71□□□□□ -0.21
S1PR3Q99500 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.71□□□□□ -0.21
S1PR3Q99500 FAM215A-202ENST00000632077 792 ntBASIC13.71□□□□□ -0.21
S1PR3Q99500 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.71□□□□□ -0.21
S1PR3Q99500 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
S1PR3Q99500 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
S1PR3Q99500 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
S1PR3Q99500 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
S1PR3Q99500 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
S1PR3Q99500 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
S1PR3Q99500 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
S1PR3Q99500 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
S1PR3Q99500 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
S1PR3Q99500 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.7□□□□□ -0.22
S1PR3Q99500 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
S1PR3Q99500 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
S1PR3Q99500 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
S1PR3Q99500 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
S1PR3Q99500 AC131009.4-201ENST00000624048 1740 ntBASIC13.7□□□□□ -0.22
S1PR3Q99500 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
S1PR3Q99500 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms