Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NOTCH4Q99466 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.81■□□□□ 0.28
NOTCH4Q99466 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.81■□□□□ 0.28
NOTCH4Q99466 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH4Q99466 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.81■□□□□ 0.28
NOTCH4Q99466 MIR4259-201ENST00000584466 101 ntBASIC16.81■□□□□ 0.28
NOTCH4Q99466 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
NOTCH4Q99466 MIR6805-201ENST00000615055 62 ntBASIC16.81■□□□□ 0.28
NOTCH4Q99466 UBALD1-205ENST00000590891 2641 ntBASIC16.81■□□□□ 0.28
NOTCH4Q99466 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NOTCH4Q99466 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.81■□□□□ 0.28
NOTCH4Q99466 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH4Q99466 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.81■□□□□ 0.28
NOTCH4Q99466 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.81■□□□□ 0.28
NOTCH4Q99466 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH4Q99466 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH4Q99466 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH4Q99466 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 AP001094.4-201ENST00000579008 2176 ntBASIC16.8■□□□□ 0.28
NOTCH4Q99466 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 RAB43P1-201ENST00000561790 589 ntBASIC16.8■□□□□ 0.28
NOTCH4Q99466 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 AC010319.3-201ENST00000597028 470 ntBASIC16.8■□□□□ 0.28
NOTCH4Q99466 TMEM261P1-201ENST00000604899 340 ntBASIC16.8■□□□□ 0.28
NOTCH4Q99466 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NOTCH4Q99466 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.8■□□□□ 0.28
NOTCH4Q99466 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
NOTCH4Q99466 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NOTCH4Q99466 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.78■□□□□ 0.28
NOTCH4Q99466 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.78■□□□□ 0.28
NOTCH4Q99466 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.78■□□□□ 0.28
NOTCH4Q99466 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NOTCH4Q99466 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NOTCH4Q99466 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NOTCH4Q99466 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NOTCH4Q99466 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NOTCH4Q99466 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NOTCH4Q99466 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms