Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 AL138831.2-201ENST00000606564 490 ntBASIC14.04□□□□□ -0.16
CLCC1Q96S66 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLCC1Q96S66 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLCC1Q96S66 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 KRT17P6-201ENST00000453795 1220 ntBASIC14.03□□□□□ -0.16
CLCC1Q96S66 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 AC104819.1-201ENST00000504587 486 ntBASIC14.03□□□□□ -0.16
CLCC1Q96S66 AC096582.2-201ENST00000510860 516 ntBASIC14.03□□□□□ -0.16
CLCC1Q96S66 AC009533.2-201ENST00000543664 586 ntBASIC14.03□□□□□ -0.16
CLCC1Q96S66 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 AC092329.2-201ENST00000598402 547 ntBASIC14.03□□□□□ -0.16
CLCC1Q96S66 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 AC093525.9-201ENST00000624961 1746 ntBASIC14.03□□□□□ -0.16
CLCC1Q96S66 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLCC1Q96S66 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLCC1Q96S66 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLCC1Q96S66 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.02□□□□□ -0.16
CLCC1Q96S66 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLCC1Q96S66 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLCC1Q96S66 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLCC1Q96S66 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLCC1Q96S66 AC005915.1-201ENST00000624912 2018 ntBASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms