Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 AL512384.1-201ENST00000406683 331 ntBASIC21.59■■□□□ 1.05
NBPF4Q96M43 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF4Q96M43 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF4Q96M43 FTH1-202ENST00000526640 786 ntTSL 2 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF4Q96M43 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF4Q96M43 MIR6752-201ENST00000618442 71 ntBASIC21.59■■□□□ 1.05
NBPF4Q96M43 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF4Q96M43 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF4Q96M43 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF4Q96M43 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF4Q96M43 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF4Q96M43 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF4Q96M43 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NBPF4Q96M43 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF4Q96M43 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF4Q96M43 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
NBPF4Q96M43 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF4Q96M43 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF4Q96M43 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.58■■□□□ 1.05
NBPF4Q96M43 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF4Q96M43 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF4Q96M43 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
NBPF4Q96M43 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC21.58■■□□□ 1.05
NBPF4Q96M43 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF4Q96M43 AC098850.1-201ENST00000419919 790 ntBASIC21.58■■□□□ 1.05
NBPF4Q96M43 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF4Q96M43 IGHV3-71-201ENST00000523324 359 ntBASIC21.58■■□□□ 1.05
NBPF4Q96M43 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF4Q96M43 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21.58■■□□□ 1.05
NBPF4Q96M43 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF4Q96M43 AL645608.8-201ENST00000606034 2086 ntBASIC21.58■■□□□ 1.05
NBPF4Q96M43 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC21.58■■□□□ 1.04
NBPF4Q96M43 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF4Q96M43 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
NBPF4Q96M43 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF4Q96M43 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF4Q96M43 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.58■■□□□ 1.04
NBPF4Q96M43 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF4Q96M43 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
NBPF4Q96M43 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF4Q96M43 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF4Q96M43 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF4Q96M43 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 FZD10-202ENST00000539839 3282 ntBASIC21.57■■□□□ 1.04
NBPF4Q96M43 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 CTBP2P3-201ENST00000585629 1255 ntBASIC21.57■■□□□ 1.04
NBPF4Q96M43 IFT20-216ENST00000588477 774 ntTSL 5 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF4Q96M43 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.57■■□□□ 1.04
NBPF4Q96M43 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.56■■□□□ 1.04
NBPF4Q96M43 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF4Q96M43 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
NBPF4Q96M43 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
NBPF4Q96M43 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.56■■□□□ 1.04
NBPF4Q96M43 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NBPF4Q96M43 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF4Q96M43 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF4Q96M43 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF4Q96M43 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF4Q96M43 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF4Q96M43 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms