Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 AC018712.1-201ENST00000455767 687 ntBASIC17.12■□□□□ 0.33
C9orf72Q96LT7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 BX640515.1-201ENST00000617215 977 ntBASIC17.12■□□□□ 0.33
C9orf72Q96LT7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 SIGLEC16-201ENST00000599858 1437 ntBASIC17.12■□□□□ 0.33
C9orf72Q96LT7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 GGT3P-204ENST00000453783 1664 ntBASIC17.11■□□□□ 0.33
C9orf72Q96LT7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 AL590627.1-203ENST00000421194 1026 ntBASIC17.11■□□□□ 0.33
C9orf72Q96LT7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 TERC-201ENST00000602385 541 ntBASIC17.11■□□□□ 0.33
C9orf72Q96LT7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 AC120114.3-201ENST00000611923 658 ntBASIC17.11■□□□□ 0.33
C9orf72Q96LT7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 AL139011.1-202ENST00000642063 584 ntBASIC17.11■□□□□ 0.33
C9orf72Q96LT7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 AL590787.1-201ENST00000568856 1315 ntBASIC17.11■□□□□ 0.33
C9orf72Q96LT7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
C9orf72Q96LT7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 AC093909.1-201ENST00000504731 1122 ntBASIC17.1■□□□□ 0.33
C9orf72Q96LT7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 AC103702.1-201ENST00000548801 2630 ntBASIC17.1■□□□□ 0.33
C9orf72Q96LT7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf72Q96LT7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms