Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TRIM47Q96LD4 AC116353.5-201ENST00000638148 1699 ntBASIC19.33■□□□□ 0.69
TRIM47Q96LD4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM47Q96LD4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM47Q96LD4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM47Q96LD4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM47Q96LD4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.33■□□□□ 0.69
TRIM47Q96LD4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM47Q96LD4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TRIM47Q96LD4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM47Q96LD4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 CROCCP1-201ENST00000426910 5675 ntBASIC19.33■□□□□ 0.68
TRIM47Q96LD4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM47Q96LD4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 AC011676.5-201ENST00000624864 2660 ntBASIC19.32■□□□□ 0.68
TRIM47Q96LD4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 SPDYE12P-201ENST00000618416 771 ntBASIC19.32■□□□□ 0.68
TRIM47Q96LD4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM47Q96LD4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM47Q96LD4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms